RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 PWP1Q13610 501 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 DOC2AQ14183 400 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 RCN2Q14257 317 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 ZIC1Q15915 447 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 XKR6Q5GH73 641 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 GRHL2Q6ISB3 625 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 FBXO42Q6P3S6 717 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 TMIGD1Q6UXZ0 262 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 RNF165Q6ZSG1 346 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 RAB11FIP2Q7L804 512 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 B3GNT8Q7Z7M8 397 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 ZNF655Q8N720 491 aaPredicted RBP13.04□□□□□ -0.32
PSMC6-205ENST00000553899 TRPV3Q8NET8 790 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 ESAMQ96AP7 390 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 OR2A5Q96R48 311 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 CCT7Q99832 543 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 SLC29A3Q9BZD2 475 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 ASPSCR1Q9BZE9 553 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 NRSN2Q9GZP1 204 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 SYNDIG1Q9H7V2 258 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 NOL11Q9H8H0 719 aaKnown RBP13.04□□□□□ -0.32
PSMC6-205ENST00000553899 ACTR8Q9H981 624 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 FANCEQ9HB96 536 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 GEMIN8Q9NWZ8 242 aaKnown RBP13.04□□□□□ -0.32
PSMC6-205ENST00000553899 TRPS1Q9UHF7 1281 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 HAO1Q9UJM8 370 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 SERTAD3Q9UJW9 196 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 PCDHGA3Q9Y5H0 932 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 AP1M2Q9Y6Q5 423 aa13.04□□□□□ -0.32
PSMC6-205ENST00000553899 MDC1Q14676 2089 aaKnown RBP13.03□□□□□ -0.32
PSMC6-205ENST00000553899 SERTM1A2A2V5 107 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 FITM1A5D6W6 292 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 CASC3O15234 703 aaKnown RBP13.03□□□□□ -0.32
PSMC6-205ENST00000553899 CTSVO60911 334 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 FGF5P12034 268 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 SCTRP47872 440 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 TRAF3Q13114 568 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 TARDBPQ13148 414 aaKnown RBP eCLIP13.03□□□□□ -0.32
PSMC6-205ENST00000553899 C16orf72Q14CZ0 275 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
PSMC6-205ENST00000553899 CATSPEREQ5SY80 951 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 ATG16L1Q676U5 607 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 MED27Q6P2C8 311 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 RGS9BPQ6ZS82 235 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 MILR1Q7Z6M3 343 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 TMPRSS11BQ86T26 416 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 TRIM73Q86UV7 250 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 MCATQ8IVS2 390 aaKnown RBP13.03□□□□□ -0.32
PSMC6-205ENST00000553899 LSMEM2Q8N112 164 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 CCNYL1Q8N7R7 359 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 MFSD9Q8NBP5 474 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 ATP6V1E2Q96A05 226 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 TM4SF19Q96DZ7 209 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 PPM1MQ96MI6 270 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 SELENOSQ9BQE4 189 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 DDA1Q9BW61 102 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 FGF21Q9NSA1 209 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 INTS9Q9NV88 658 aaKnown RBP13.03□□□□□ -0.32
PSMC6-205ENST00000553899 CUEDC1Q9NWM3 386 aaPredicted RBP13.03□□□□□ -0.32
PSMC6-205ENST00000553899 SOHLH2Q9NX45 425 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 KLHL3Q9UH77 587 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 ZFP69BQ9UJL9 534 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 WASF3Q9UPY6 502 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 SH2B3Q9UQQ2 575 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 PCDHGA4Q9Y5G9 962 aa13.03□□□□□ -0.32
PSMC6-205ENST00000553899 LRRC14BA6NHZ5 514 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 H3BMH7 237 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 FOXE1O00358 373 aaPredicted RBP13.02□□□□□ -0.33
PSMC6-205ENST00000553899 PLD2O14939 933 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 ZSCAN9O15535 394 aaPredicted RBP13.02□□□□□ -0.33
PSMC6-205ENST00000553899 PRAMEF4O60810 478 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 CLEC3AO75596 197 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 DXOO77932 396 aaKnown RBP13.02□□□□□ -0.33
PSMC6-205ENST00000553899 PVRP15151 417 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 MPSTP25325 297 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 YBX1P67809 324 aaKnown RBP13.02□□□□□ -0.33
PSMC6-205ENST00000553899 CCDC157Q569K6 752 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 FBXO48Q5FWF7 155 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 SNAP47Q5SQN1 464 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 GARNL3Q5VVW2 1013 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 PRAMEF9Q5VWM5 478 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 NIPAL1Q6NVV3 410 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 TLDC1Q6P9B6 456 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 GPRIN3Q6ZVF9 776 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 ANKRD42Q8N9B4 389 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 RCBTB1Q8NDN9 531 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 OR52B6Q8NGF0 335 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 PPP1R14CQ8TAE6 165 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 AGAP11Q8TF27 550 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 RERGQ96A58 199 aaPredicted RBP13.02□□□□□ -0.33
PSMC6-205ENST00000553899 ZNF501Q96CX3 271 aaPredicted RBP13.02□□□□□ -0.33
PSMC6-205ENST00000553899 NSUN5Q96P11 429 aaKnown RBP13.02□□□□□ -0.33
PSMC6-205ENST00000553899 MECRQ9BV79 373 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 NLNQ9BYT8 704 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 FAM117AQ9C073 453 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 FAM60AQ9NP50 221 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 SEMA4BQ9NPR2 832 aaPredicted RBP13.02□□□□□ -0.33
PSMC6-205ENST00000553899 THAP1Q9NVV9 213 aa13.02□□□□□ -0.33
PSMC6-205ENST00000553899 ZNF490Q9ULM2 529 aaPredicted RBP13.02□□□□□ -0.33
PSMC6-205ENST00000553899 PCDHB3Q9Y5E6 796 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms