RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CCDC91Q7Z6B0 441 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 ADAMTSL2Q86TH1 951 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 C17orf64Q86WR6 236 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 MCATQ8IVS2 390 aaKnown RBP8□□□□□ -1.13
PSEN1-209ENST00000553855 CNPY4Q8N129 248 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 DNAJC22Q8N4W6 341 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 ZNF655Q8N720 491 aaPredicted RBP8□□□□□ -1.13
PSEN1-209ENST00000553855 OR2L3Q8NG85 312 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 OR1L3Q8NH93 324 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 ZNF480Q8WV37 535 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 NANOS1Q8WY41 292 aaKnown RBP8□□□□□ -1.13
PSEN1-209ENST00000553855 ANKRD7Q92527 254 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 GAL3ST3Q96A11 431 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 SLC45A3Q96JT2 553 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 TSNARE1Q96NA8 513 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 LRFN5Q96NI6 719 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 NRTNQ99748 197 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 OLFM1Q99784 485 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 ZFYVE21Q9BQ24 234 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 CCDC77Q9BR77 488 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 DPH7Q9BTV6 452 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 GPR87Q9BY21 358 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 PLAC1Q9HBJ0 212 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 FRRS1LQ9P0K9 344 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 NDOR1Q9UHB4 597 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 CROTQ9UKG9 612 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 TRIM33Q9UPN9 1127 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 PDE10AQ9Y233 779 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 PADI2Q9Y2J8 665 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 MED16Q9Y2X0 877 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 IGF2RP11717 2491 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 USP24Q9UPU5 2620 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 AKAP13Q12802 2813 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 A0A087WUV0 522 aaPredicted RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 A0A0J9YVX5 310 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 LOC101059948A0A1B0GTJ6 334 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 E7ENX8 843 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 PRPF4O43172 522 aaKnown RBP eCLIP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 KRT38O76015 456 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 ACSL3O95573 720 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 GUCA1CO95843 209 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 BPNT1O95861 308 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 EIF2S1P05198 315 aaKnown RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 CCDC166P0CW27 439 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 ERGP11308 486 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 LIFP15018 202 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 ZNF28P17035 718 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 HSD3B2P26439 372 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 PSMB5P28074 263 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 IMPA1P29218 277 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 MSH2P43246 934 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 HNMTP50135 292 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 SERPINB9P50453 376 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 VSX2P58304 361 aaPredicted RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 TBPL1P62380 186 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 DCDP81605 110 aaKnown RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 TAP2Q03519 686 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 NAE1Q13564 534 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 DNASE1L3Q13609 305 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 FASTKQ14296 549 aaKnown RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 NDUFA9Q16795 377 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 LCE2CQ5TA81 110 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 KIAA1614Q5VZ46 1190 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 KLC3Q6P597 504 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 TRMT10CQ7L0Y3 403 aaKnown RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 TIPARPQ7Z3E1 657 aaKnown RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 FAM20CQ8IXL6 584 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 COL27A1Q8IZC6 1860 aaPredicted RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 TCAIMQ8N3R3 496 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 FAM169BQ8N8A8 192 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 PPFIBP2Q8ND30 876 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 OR2A1Q8NGT9 310 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 PROKR1Q8TCW9 393 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 FBXL8Q96CD0 374 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 RNF31Q96EP0 1072 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 UBL7Q96S82 380 aaPredicted RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 GPR22Q99680 433 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 MENTQ9BUN1 341 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 SPRY4Q9C004 299 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 DERL2Q9GZP9 239 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 ATG10Q9H0Y0 220 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 CDC42EP4Q9H3Q1 356 aaKnown RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 PRORYQ9H606 182 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 ACSS3Q9H6R3 686 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 CNOT10Q9H9A5 744 aaKnown RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 NMRAL1Q9HBL8 299 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 FAM60AQ9NP50 221 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 SMYD2Q9NRG4 433 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 TMEM184CQ9NVA4 438 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 NINJ2Q9NZG7 142 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 STOX2Q9P2F5 926 aaPredicted RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 IFT80Q9P2H3 777 aaPredicted RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 ADAMTS6Q9UKP5 1117 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 NFU1Q9UMS0 254 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 FARSAQ9Y285 508 aaKnown RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 KLHL20Q9Y2M5 609 aa7.99□□□□□ -1.13
PSEN1-209ENST00000553855 MTO1Q9Y2Z2 717 aaKnown RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 URB1O60287 2271 aaKnown RBP7.99□□□□□ -1.13
PSEN1-209ENST00000553855 ACACAQ13085 2346 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 PIKFYVEQ9Y2I7 2098 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms