RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 FAM219BQ5XKK7 198 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 ERMP1Q7Z2K6 904 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 VN1R5Q7Z5H4 357 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 TMPRSS11BQ86T26 416 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 MCATQ8IVS2 390 aaKnown RBP14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 L3MBTL4Q8NA19 623 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 OR52B6Q8NGF0 335 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 PKNOX2Q96KN3 472 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 SLC46A1Q96NT5 459 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 OR6C1Q96RD1 312 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 ZFYVE21Q9BQ24 234 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 MECRQ9BV79 373 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 DDA1Q9BW61 102 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 B3GNT4Q9C0J1 378 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 ZNF490Q9ULM2 529 aaPredicted RBP14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 DYRK1BQ9Y463 629 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 PCDHGA4Q9Y5G9 962 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 DMXL2Q8TDJ6 3036 aa14.21□□□□□ -0.13
MTHFD1-204ENST00000553405 FER1L5A0AVI2 2057 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 TRBC2A0A5B9 178 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 FITM1A5D6W6 292 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 TRABD2BA6NFA1 517 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 DYNC1I1O14576 645 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 ATP8B1O43520 1251 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 MED26O95402 600 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 EPB42P16452 691 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 SCTRP47872 440 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 SERPINB4P48594 390 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 CDH13P55290 713 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 GABREP78334 506 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 ACY1Q03154 408 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 CHIT1Q13231 466 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 TUBB3Q13509 450 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 IL11RAQ14626 422 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 PRTGQ2VWP7 1150 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 LIPMQ5VYY2 423 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 ADNP2Q6IQ32 1131 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 SNX31Q8N9S9 440 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 ANKRD53Q8N9V6 530 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 GATA6Q92908 595 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 TM4SF19Q96DZ7 209 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 CCDC126Q96EE4 140 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 NTMT1Q9BV86 223 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 GATA5Q9BWX5 397 aaPredicted RBP14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 CAPS2Q9BXY5 557 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 IQCGQ9H095 443 aaKnown RBP14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 NOL11Q9H8H0 719 aaKnown RBP14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 IPPKQ9H8X2 491 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 FOXJ2Q9P0K8 574 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 PISDQ9UG56 409 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 PLCL2Q9UPR0 1127 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 PCDHGA7Q9Y5G6 932 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 B3GALT1Q9Y5Z6 326 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 SDK2Q58EX2 2172 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 APC2O95996 2303 aa14.2□□□□□ -0.14
MTHFD1-204ENST00000553405 A0A0J9YVX5 310 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 FEZF1A0PJY2 475 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 HMGB1P1B2RPK0 211 aaPredicted RBP14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 H0YGG7 62 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 UBFD1O14562 309 aaKnown RBP14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 P2RX6O15547 441 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 ZWINTO95229 277 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 TSPAN8P19075 237 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 CCR10P46092 362 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 PIK3CGP48736 1102 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 NAGLUP54802 743 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 RAB15P59190 212 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 ARF3P61204 181 aaPredicted RBP14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 CLCQ05315 142 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 SLBPQ14493 270 aaKnown RBP eCLIP14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 TMTC4Q5T4D3 741 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 PRAMEF17Q5VTA0 474 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 PWWP2BQ6NUJ5 590 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 FRMD7Q6ZUT3 714 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 LSMEM2Q8N112 164 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 MFSD9Q8NBP5 474 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 OR8K5Q8NH50 307 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 CREB3L4Q8TEY5 395 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 PTCD3Q96EY7 689 aaKnown RBP14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 TAAR9Q96RI9 348 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 CTRCQ99895 268 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 AICDAQ9GZX7 198 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 SPRTNQ9H040 489 aaPredicted RBP14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 NT5DC2Q9H857 520 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 TNFRSF12AQ9NP84 129 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 SEMA4BQ9NPR2 832 aaPredicted RBP14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 SLC39A1Q9NY26 324 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 MID2Q9UJV3 735 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 SEC16AO15027 2179 aa14.19□□□□□ -0.14
MTHFD1-204ENST00000553405 TMEM150CB9EJG8 249 aa14.18□□□□□ -0.14
MTHFD1-204ENST00000553405 NVLO15381 856 aaKnown RBP14.18□□□□□ -0.14
MTHFD1-204ENST00000553405 BIRC5O15392 142 aa14.18□□□□□ -0.14
MTHFD1-204ENST00000553405 BRINP1O60477 761 aa14.18□□□□□ -0.14
MTHFD1-204ENST00000553405 SRPX2O60687 465 aaPredicted RBP14.18□□□□□ -0.14
MTHFD1-204ENST00000553405 UGDHO60701 494 aa14.18□□□□□ -0.14
MTHFD1-204ENST00000553405 TRIM13O60858 407 aa14.18□□□□□ -0.14
MTHFD1-204ENST00000553405 TNFSF15O95150 251 aa14.18□□□□□ -0.14
MTHFD1-204ENST00000553405 JMJD7P0C870 316 aa14.18□□□□□ -0.14
MTHFD1-204ENST00000553405 ZNF28P17035 718 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms