RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 WNT3AP56704 352 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 MLF1P58340 268 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 SLC26A5P58743 744 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 ARF3P61204 181 aaPredicted RBP12.54□□□□□ -0.4
SNRPF-203ENST00000551316 RPA4Q13156 261 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 USP10Q14694 798 aaKnown RBP12.54□□□□□ -0.4
SNRPF-203ENST00000551316 SFT2D3Q587I9 215 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 MFSD4BQ5TF39 518 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 ZDHHC20Q5W0Z9 365 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 OR4K2Q8NGD2 314 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 OR13C4Q8NGS5 318 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 ENOX1Q8TC92 643 aaKnown RBP12.54□□□□□ -0.4
SNRPF-203ENST00000551316 ELP5Q8TE02 316 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 DCUN1D1Q96GG9 259 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 CAPZA3Q96KX2 299 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 MRGPRX2Q96LB1 330 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 SPATA13Q96N96 652 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 TRABDQ9H4I3 376 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 LUC7LQ9NQ29 371 aaKnown RBP12.54□□□□□ -0.4
SNRPF-203ENST00000551316 CRLS1Q9UJA2 301 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 BCKDKO14874 412 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 SRPX2O60687 465 aaPredicted RBP12.53□□□□□ -0.4
SNRPF-203ENST00000551316 IGHG3P01860 377 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 EGR1P18146 543 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 CD9P21926 228 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 GJC1P36383 396 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 PPIAP62937 165 aaKnown RBP12.53□□□□□ -0.4
SNRPF-203ENST00000551316 SF1Q15637 639 aaKnown RBP12.53□□□□□ -0.4
SNRPF-203ENST00000551316 SLC14A2Q15849 920 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 EXT1Q16394 746 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 TYSND1Q2T9J0 566 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 BOLA3Q53S33 107 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 KIAA0930Q6ICG6 404 aaPredicted RBP12.53□□□□□ -0.4
SNRPF-203ENST00000551316 BHLHB9Q6PI77 547 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 TRILQ7L0X0 811 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 VRK3Q8IV63 474 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 METTL21AQ8WXB1 218 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 SMPDL3BQ92485 455 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 OXNAD1Q96HP4 312 aaPredicted RBP12.53□□□□□ -0.4
SNRPF-203ENST00000551316 FICDQ9BVA6 458 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 TTTY12Q9BZ98 90 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 GLOD4Q9HC38 313 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 HAUS2Q9NVX0 235 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 ALKBH4Q9NXW9 302 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 TAB2Q9NYJ8 693 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 POLG2Q9UHN1 485 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 PKP3Q9Y446 797 aa12.53□□□□□ -0.4
SNRPF-203ENST00000551316 KLRC4-KLRK1H3BQV0 150 aa12.52□□□□□ -0.41
SNRPF-203ENST00000551316 DDX3XO00571 662 aaKnown RBP eCLIP12.52□□□□□ -0.415e-45■■■□□ 18.1
SNRPF-203ENST00000551316 STX7O15400 261 aaKnown RBP12.52□□□□□ -0.41
SNRPF-203ENST00000551316 WDR1O75083 606 aa12.52□□□□□ -0.41
SNRPF-203ENST00000551316 S1PR4O95977 384 aa12.52□□□□□ -0.41
SNRPF-203ENST00000551316 CFPP27918 469 aa12.52□□□□□ -0.41
SNRPF-203ENST00000551316 MAGEA5P43359 124 aa12.52□□□□□ -0.41
SNRPF-203ENST00000551316 CSE1LP55060 971 aaKnown RBP12.52□□□□□ -0.41
SNRPF-203ENST00000551316 TYRO3Q06418 890 aa12.52□□□□□ -0.41
SNRPF-203ENST00000551316 CCSMST1Q4G0I0 132 aa12.52□□□□□ -0.41
SNRPF-203ENST00000551316 FBXO42Q6P3S6 717 aa12.52□□□□□ -0.41
SNRPF-203ENST00000551316 LRRC8BQ6P9F7 803 aa12.52□□□□□ -0.41
SNRPF-203ENST00000551316 OR9A4Q8NGU2 314 aa12.52□□□□□ -0.41
SNRPF-203ENST00000551316 CREB3L4Q8TEY5 395 aa12.52□□□□□ -0.41
SNRPF-203ENST00000551316 LCORQ96JN0 433 aaPredicted RBP12.52□□□□□ -0.41
SNRPF-203ENST00000551316 HS3ST6Q96QI5 342 aa12.52□□□□□ -0.41
SNRPF-203ENST00000551316 COPS8Q99627 209 aa12.52□□□□□ -0.41
SNRPF-203ENST00000551316 WDR83Q9BRX9 315 aaKnown RBP12.52□□□□□ -0.41
SNRPF-203ENST00000551316 ADAM19Q9H013 955 aa12.52□□□□□ -0.41
SNRPF-203ENST00000551316 HCN3Q9P1Z3 774 aa12.52□□□□□ -0.41
SNRPF-203ENST00000551316 A0A1B0GVC2 190 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 A0A1W2PPV9 198 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 SLC5A10A0PJK1 596 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 FEZF1A0PJY2 475 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 OR2A25A4D2G3 310 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 OR14I1A6ND48 311 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 DEFB108AA8MXU0 73 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 DVL2O14641 736 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 TLX2O43763 284 aaPredicted RBP12.51□□□□□ -0.41
SNRPF-203ENST00000551316 GLSO94925 669 aaPredicted RBP12.51□□□□□ -0.41
SNRPF-203ENST00000551316 GOSR1O95249 250 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 ANXA5P08758 320 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 ERVK-10P10266 1014 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 SORDQ00796 357 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 AP1B1Q10567 949 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 SLC1A5Q15758 541 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 ACKR1Q16570 336 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 CCDC38Q502W7 563 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 NPNTQ6UXI9 565 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 KIAA0408Q6ZU52 694 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 CYP4Z2PQ8N1L4 340 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 TMEM251Q8N6I4 163 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 CSNK1A1LQ8N752 337 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 PLD5Q8N7P1 536 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 OR2L3Q8NG85 312 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 OR2L8Q8NGY9 312 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 FAF2Q96CS3 445 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 MVB12AQ96EY5 273 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 SRPK1Q96SB4 655 aaKnown RBP12.51□□□□□ -0.41
SNRPF-203ENST00000551316 AMBRA1Q9C0C7 1298 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 INTS7Q9NVH2 962 aaKnown RBP12.51□□□□□ -0.41
SNRPF-203ENST00000551316 MYO1AQ9UBC5 1043 aa12.51□□□□□ -0.41
SNRPF-203ENST00000551316 KLK4Q9Y5K2 254 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms