RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 PAPLNO95428 1278 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 NPPBP16860 134 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 PPIBP23284 216 aaKnown RBP17.29■□□□□ 0.36
GNE-204ENST00000539208 VIPR2P41587 438 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 SLC6A11P48066 632 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 MESP2Q0VG99 397 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 VEZF1Q14119 521 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 ELAVL3Q14576 367 aaKnown RBP17.29■□□□□ 0.36
GNE-204ENST00000539208 GAB4Q2WGN9 574 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 TMEM52BQ4KMG9 183 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 CPTPQ5TA50 214 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 ZNF773Q6PK81 442 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 XKR5Q6UX68 686 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 TMEM179BQ7Z7N9 219 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 ZDHHC21Q8IVQ6 265 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 ZNF420Q8TAQ5 688 aaPredicted RBP17.29■□□□□ 0.36
GNE-204ENST00000539208 HDAC2Q92769 488 aaKnown RBP17.29■□□□□ 0.36
GNE-204ENST00000539208 CXorf40BQ96DE9 158 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 PPP1R16AQ96I34 528 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 EFCAB11Q9BUY7 163 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 AMBRA1Q9C0C7 1298 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 ING2Q9H160 280 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 OR2AG1Q9H205 316 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 DEC1Q9P2X7 70 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 MUC22E2RYF6 1773 aaPredicted RBP17.29■□□□□ 0.36
GNE-204ENST00000539208 YY2O15391 372 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 SEMG1P04279 462 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 C6P13671 934 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 ADRB3P13945 408 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 HPCAL1P37235 193 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 GPR1P46091 355 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 PMS2P3Q13401 168 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 SHQ1Q6PI26 577 aaKnown RBP17.29■□□□□ 0.36
GNE-204ENST00000539208 SPRED2Q7Z698 418 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 PTOV1Q86YD1 416 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 CLVS1Q8IUQ0 354 aaPredicted RBP17.29■□□□□ 0.36
GNE-204ENST00000539208 LAS2Q8IYD9 372 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 HS3ST5Q8IZT8 346 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 TERB1Q8NA31 727 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 OR9A1PQ8NGU1 263 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 SMG7Q92540 1137 aaKnown RBP17.29■□□□□ 0.36
GNE-204ENST00000539208 ISOC1Q96CN7 298 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 FAM129BQ96TA1 746 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 GABARAPL1Q9H0R8 117 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 CXorf21Q9HAI6 301 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 ITM2CQ9NQX7 267 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 CIDEBQ9UHD4 219 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 CORO2BQ9UQ03 480 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 BTBD3Q9Y2F9 522 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 AP1M2Q9Y6Q5 423 aa17.29■□□□□ 0.36
GNE-204ENST00000539208 K7ESM1 405 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 NOBOXO60393 691 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 E2F6O75461 281 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 CPNE6O95741 557 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 ABCB1P08183 1280 aaPredicted RBP17.28■□□□□ 0.36
GNE-204ENST00000539208 JUNBP17275 347 aaPredicted RBP17.28■□□□□ 0.36
GNE-204ENST00000539208 IDSP22304 550 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 ELK4P28324 431 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 TIA1P31483 386 aaKnown RBP eCLIP17.28■□□□□ 0.36
GNE-204ENST00000539208 KDELR2P33947 212 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 TBPL1P62380 186 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 KCTD8Q6ZWB6 473 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 TRAPPC5Q8IUR0 188 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 SYTL1Q8IYJ3 562 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 CLECL1Q8IZS7 167 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 ARL10Q8N8L6 244 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 DOK1Q99704 481 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 DPEP2Q9H4A9 486 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 POLR1BQ9H9Y6 1135 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 DYRK1BQ9Y463 629 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 LRRK1Q38SD2 2015 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 SLC16A6O15403 523 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 VEGFDO43915 354 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 CPSF4O95639 269 aaKnown RBP17.28■□□□□ 0.36
GNE-204ENST00000539208 C1GALT1C1LP0DN25 315 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 HLA-EP13747 358 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 RAD23AP54725 363 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 RPS13P62277 151 aaKnown RBP17.28■□□□□ 0.36
GNE-204ENST00000539208 KCNAB2Q13303 367 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 IL18R1Q13478 541 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 GTF2H3Q13889 308 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 SPIDRQ14159 915 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 PAGE2BQ5JRK9 111 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 RAET1GQ6H3X3 334 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 ADNP2Q6IQ32 1131 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 TRIM74Q86UV6 250 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 DCP2Q8IU60 420 aaKnown RBP17.28■□□□□ 0.36
GNE-204ENST00000539208 LRRC56Q8IYG6 542 aaPredicted RBP17.28■□□□□ 0.36
GNE-204ENST00000539208 SYNPOQ8N3V7 929 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 SH3KBP1Q96B97 665 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 TMEM245Q9H330 911 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 TPT1P8Q9HAU6 139 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 TM9SF3Q9HD45 589 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 ATXN10Q9UBB4 475 aa17.28■□□□□ 0.36
GNE-204ENST00000539208 TMEFF2Q9UIK5 374 aaPredicted RBP17.28■□□□□ 0.36
GNE-204ENST00000539208 C1orf226A1L170 272 aa17.27■□□□□ 0.36
GNE-204ENST00000539208 MGAT4DA6NG13 374 aa17.27■□□□□ 0.36
GNE-204ENST00000539208 ZNF682O95780 498 aa17.27■□□□□ 0.36
GNE-204ENST00000539208 CRHBPP24387 322 aa17.27■□□□□ 0.36
GNE-204ENST00000539208 DCKP27707 260 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms