RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 RFPL3O75679 317 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 CHEK2O96017 543 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 ESRRAP11474 423 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 NCF2P19878 526 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 PRDX6P30041 224 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 BTKQ06187 659 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 PDCD2Q16342 344 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 LSM12Q3MHD2 195 aaKnown RBP12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 UGT3A2Q3SY77 523 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 THEMIS2Q5TEJ8 643 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 KANK2Q63ZY3 851 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 ICE2Q659A1 982 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 LCTLQ6UWM7 567 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 OOSP2Q86WS3 158 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 CPSF7Q8N684 471 aaKnown RBP12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 SNX31Q8N9S9 440 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 OR2L3Q8NG85 312 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 OR6C4Q8NGE1 309 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 NAT6Q93015 286 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 CMTM5Q96DZ9 223 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 CDK15Q96Q40 435 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 NOL11Q9H8H0 719 aaKnown RBP12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 IPPKQ9H8X2 491 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 SLC6A20Q9NP91 592 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 TAGLN3Q9UI15 199 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 POMT2Q9UKY4 750 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 KLHL20Q9Y2M5 609 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 ADAMTS20P59510 1910 aa12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 MDC1Q14676 2089 aaKnown RBP12.9□□□□□ -0.34
TRAPPC4-214ENST00000533632 H0YHG0 523 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 SDHDO14521 159 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 KIF1CO43896 1103 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 CRCPO75575 148 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 CBX6O95503 412 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 OTCP00480 354 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 GP1BAP07359 652 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 UROSP10746 265 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 EPB42P16452 691 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 AMD1P17707 334 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 CD22P20273 847 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 CCND1P24385 295 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 PTPN4P29074 926 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 EPHA3P29320 983 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 DUSP3P51452 185 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 CCL7P80098 99 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 TRAF3Q13114 568 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 KIR2DS3Q14952 304 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 CATSPEREQ5SY80 951 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 KIAA1614Q5VZ46 1190 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 SPESP1Q6UW49 350 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 DHRS13Q6UX07 377 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 GPRIN3Q6ZVF9 776 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 USP53Q70EK8 1073 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 ADAMTS14Q8WXS8 1223 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 RAB3IPQ96QF0 476 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 OR52B2Q96RD2 323 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 NUDT22Q9BRQ3 303 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 SPNS1Q9H2V7 528 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 WDR55Q9H6Y2 383 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 ARL8BQ9NVJ2 186 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 ARMCX1Q9P291 453 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 ATXN7L1Q9ULK2 861 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 PCDHB11Q9Y5F2 797 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 CAPN7Q9Y6W3 813 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 C2orf74A8MZ97 194 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 TMEM233B4DJY2 109 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 CAPN5O15484 640 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 PRAMEF10O60809 474 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 KATNA1O75449 491 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 RPLP0P05388 317 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 CDH1P12830 882 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 HOXB3P14651 431 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 PVRP15151 417 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 VARSP26640 1264 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 GPLD1P80108 840 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 INSM1Q01101 510 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 PRDX1Q06830 199 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 ILKQ13418 452 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 RBBP7Q16576 425 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 CCDC157Q569K6 752 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 LETMD1Q6P1Q0 360 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 SLCO4C1Q6ZQN7 724 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 SYVN1Q86TM6 617 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 NCSTNQ92542 709 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 C19orf60Q96EN9 201 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 KLHL25Q9H0H3 589 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 SYNPO2LQ9H987 977 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 ENTPD2Q9Y5L3 495 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 DNAJC15Q9Y5T4 150 aa12.89□□□□□ -0.35
TRAPPC4-214ENST00000533632 CEP295Q9C0D2 2601 aa12.88□□□□□ -0.35
TRAPPC4-214ENST00000533632 E9PBE3 544 aa12.88□□□□□ -0.35
TRAPPC4-214ENST00000533632 NTN3O00634 580 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-214ENST00000533632 DUX1O43812 170 aa12.88□□□□□ -0.35
TRAPPC4-214ENST00000533632 KLHL41O60662 606 aa12.88□□□□□ -0.35
TRAPPC4-214ENST00000533632 WFS1O76024 890 aa12.88□□□□□ -0.35
TRAPPC4-214ENST00000533632 ENO1P06733 434 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-214ENST00000533632 ERVPABLB-1P60509 514 aa12.88□□□□□ -0.35
TRAPPC4-214ENST00000533632 MEF2AQ02078 507 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-214ENST00000533632 SF1Q15637 639 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-214ENST00000533632 NXNQ6DKJ4 435 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms