RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 C19orf47Q8N9M1 422 aaKnown RBP8.34□□□□□ -1.07
COPB1-210ENST00000533533 OR9A1PQ8NGU1 263 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 OR2Y1Q8NGV0 311 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 OR2L8Q8NGY9 312 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 RNF166Q96A37 237 aaPredicted RBP8.34□□□□□ -1.07
COPB1-210ENST00000533533 ALKBH8Q96BT7 664 aaKnown RBP8.34□□□□□ -1.07
COPB1-210ENST00000533533 GBP5Q96PP8 586 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 PKP4Q99569 1192 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 OLFM1Q99784 485 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 CPNE1Q99829 537 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 ACAT2Q9BWD1 397 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 FAM129AQ9BZQ8 928 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 CHRNA10Q9GZZ6 450 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 CDC42EP4Q9H3Q1 356 aaKnown RBP8.34□□□□□ -1.07
COPB1-210ENST00000533533 RHOJQ9H4E5 214 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 FAM60AQ9NP50 221 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 AGPAT4Q9NRZ5 378 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 P4HTMQ9NXG6 502 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 NINJ2Q9NZG7 142 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 KLHL42Q9P2K6 505 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 GPN3Q9UHW5 284 aaPredicted RBP8.34□□□□□ -1.07
COPB1-210ENST00000533533 NTNG1Q9Y2I2 539 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 KLHL20Q9Y2M5 609 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 MTO1Q9Y2Z2 717 aaKnown RBP8.34□□□□□ -1.07
COPB1-210ENST00000533533 PCDHGA10Q9Y5H3 936 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 SPG11Q96JI7 2443 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 HIVEP1P15822 2718 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 CACNA1CQ13936 2221 aa8.34□□□□□ -1.07
COPB1-210ENST00000533533 MED13LQ71F56 2210 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 PDZD2O15018 2839 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 A0A0J9YY10 115 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 MASP2O00187 686 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 HCRTR1O43613 425 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 ZNF500O60304 480 aaPredicted RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 CNOT3O75175 753 aaKnown RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 PSIP1O75475 530 aaKnown RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 FAM155BO75949 473 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 HIST1H2AGP0C0S8 130 aaPredicted RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 HIST1H2ADP20671 130 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 FDXRP22570 491 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 PSMB5P28074 263 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 TNFRSF8P28908 595 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 PEBP1P30086 187 aaKnown RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 RPA3P35244 121 aaPredicted RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 SPRP35270 261 aaPredicted RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 GLRBP48167 497 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 GABRA4P48169 554 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 TAS2R39P59534 338 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 TIAL1Q01085 375 aaKnown RBP eCLIP8.33□□□□□ -1.08
COPB1-210ENST00000533533 CBLBQ13191 982 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 FASTKQ14296 549 aaKnown RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 GRB7Q14451 532 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 KIR2DS3Q14952 304 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 ZIC1Q15915 447 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 DEFB110Q30KQ9 67 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 NKAIN1Q4KMZ8 207 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 GRTP1Q5TC63 336 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 SUSD1Q6UWL2 747 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 CYHR1Q6ZMK1 362 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 RAPH1Q70E73 1250 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 PPP1R32Q7Z5V6 425 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 SRRM1Q8IYB3 904 aaKnown RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 GSPT2Q8IYD1 628 aaKnown RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 LINC01555Q8NAE3 123 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 PPFIBP2Q8ND30 876 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 ST6GALNAC3Q8NDV1 305 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 PROKR1Q8TCW9 393 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 MCOLN3Q8TDD5 553 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 ASB11Q8WXH4 323 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 SLC22A18Q96BI1 424 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 PTERQ96BW5 349 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 TSPAN17Q96FV3 270 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 HIST1H2AHQ96KK5 128 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 OR2A14Q96R47 310 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 RBBP8Q99708 897 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 MIPEPQ99797 713 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 HIST1H2AJQ99878 128 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 H2AFJQ9BTM1 129 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 TRIM54Q9BYV2 358 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 UNKQ9C0B0 810 aaKnown RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 SPRTNQ9H040 489 aaPredicted RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 L2HGDHQ9H9P8 463 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 CAB39LQ9H9S4 337 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 ZBTB20Q9HC78 741 aaPredicted RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 GPAMQ9HCL2 828 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 ATP13A2Q9NQ11 1180 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 RYDENQ9NUL5 291 aaKnown RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 INTS7Q9NVH2 962 aaKnown RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 SPATA7Q9P0W8 599 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 IFT80Q9P2H3 777 aaPredicted RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 DHCR7Q9UBM7 475 aaKnown RBP8.33□□□□□ -1.08
COPB1-210ENST00000533533 NDOR1Q9UHB4 597 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 ADAMTS6Q9UKP5 1117 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 IKBKGQ9Y6K9 419 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 NAV3Q8IVL0 2385 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 HEATR5BQ9P2D3 2071 aa8.33□□□□□ -1.08
COPB1-210ENST00000533533 CSMD2Q7Z408 3487 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 ZNF839A8K0R7 811 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 POC1B-GALNT4F8VUJ3 575 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 AGPSO00116 658 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms