RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 NR4A1P22736 598 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 ITGB7P26010 798 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 CAPGP40121 348 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 PRLHRP49683 370 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 EPHA5P54756 1037 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 SKIV2LQ15477 1246 aaKnown RBP10.97□□□□□ -0.65
CLK4-206ENST00000520878 PRSS36Q5K4E3 855 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 GPR107Q5VW38 600 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 TMIGD1Q6UXZ0 262 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 LRRTM4Q86VH4 590 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 C8orf59Q8N0T1 100 aaPredicted RBP10.97□□□□□ -0.65
CLK4-206ENST00000520878 TAGAPQ8N103 731 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 SLC5A11Q8WWX8 675 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 EXOSC8Q96B26 276 aaKnown RBP10.97□□□□□ -0.65
CLK4-206ENST00000520878 TRMT61BQ9BVS5 477 aaKnown RBP10.97□□□□□ -0.65
CLK4-206ENST00000520878 SLC6A17Q9H1V8 727 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 TMEM245Q9H330 911 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 WDR26Q9H7D7 661 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 RAB23Q9ULC3 237 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 PPT2Q9UMR5 302 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 STON1Q9Y6Q2 735 aa10.97□□□□□ -0.65
CLK4-206ENST00000520878 FRMPD3Q5JV73 1810 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 B4GAT1O43505 415 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 MAN1A2O60476 641 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 PRAMEF4O60810 478 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 SLCO2B1O94956 709 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 C1orf105O95561 183 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 ACADMP11310 421 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 POU1F1P28069 291 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 ARSFP54793 590 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 PHC1P78364 1004 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 DAG1Q14118 895 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 ATP6AP1Q15904 470 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 ZXDCQ2QGD7 858 aaPredicted RBP10.96□□□□□ -0.65
CLK4-206ENST00000520878 RUNDC3AQ59EK9 446 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 PRAMEF9Q5VWM5 478 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 TBPL2Q6SJ96 375 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 TECPR1Q7Z6L1 1165 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 HERVK_113Q902F9 699 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 PBX4Q9BYU1 374 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 C5AR2Q9P296 337 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 PPIL1Q9Y3C6 166 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 PLXNA3P51805 1871 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 EIF3FO00303 357 aaPredicted RBP10.96□□□□□ -0.65
CLK4-206ENST00000520878 ZBTB11O95625 1053 aaPredicted RBP10.96□□□□□ -0.65
CLK4-206ENST00000520878 ELK4P28324 431 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 P2RY2P41231 377 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 ASMTP46597 345 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 PNLIPRP1P54315 467 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 TP53BP2Q13625 1128 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.96□□□□□ -0.65
CLK4-206ENST00000520878 ANKRD34AQ69YU3 496 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 REXO5Q96IC2 774 aaKnown RBP10.96□□□□□ -0.65
CLK4-206ENST00000520878 ZNF514Q96K75 400 aaPredicted RBP10.96□□□□□ -0.65
CLK4-206ENST00000520878 LMLNQ96KR4 655 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 PHF12Q96QT6 1004 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 REEP1Q9H902 201 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 PHPT1Q9NRX4 125 aaPredicted RBP10.96□□□□□ -0.65
CLK4-206ENST00000520878 RASSF1Q9NS23 344 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 AHSPQ9NZD4 102 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 DNAJB9Q9UBS3 223 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 TMED5Q9Y3A6 229 aa10.96□□□□□ -0.65
CLK4-206ENST00000520878 A0A096LPI6 279 aa10.96□□□□□ -0.66
CLK4-206ENST00000520878 ETHE1O95571 254 aa10.96□□□□□ -0.66
CLK4-206ENST00000520878 C6orf47O95873 294 aa10.96□□□□□ -0.66
CLK4-206ENST00000520878 TFAP2AP05549 437 aa10.96□□□□□ -0.66
CLK4-206ENST00000520878 CISD3P0C7P0 127 aa10.96□□□□□ -0.66
CLK4-206ENST00000520878 IGFBP4P22692 258 aa10.96□□□□□ -0.66
CLK4-206ENST00000520878 PSMA3P25788 255 aa10.96□□□□□ -0.66
CLK4-206ENST00000520878 HOXA9P31269 272 aa10.96□□□□□ -0.66
CLK4-206ENST00000520878 ABHD18Q0P651 414 aa10.96□□□□□ -0.66
CLK4-206ENST00000520878 C11orf74Q86VG3 221 aa10.96□□□□□ -0.66
CLK4-206ENST00000520878 NRBF2Q96F24 287 aa10.96□□□□□ -0.66
CLK4-206ENST00000520878 ATAD3AQ9NVI7 634 aa10.96□□□□□ -0.66
CLK4-206ENST00000520878 PDP1Q9P0J1 537 aaPredicted RBP10.96□□□□□ -0.66
CLK4-206ENST00000520878 KLHL42Q9P2K6 505 aa10.96□□□□□ -0.66
CLK4-206ENST00000520878 AGAP14A8MT82 685 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 ISM1B1AKI9 464 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 NUDT7P0C024 238 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 C1GALT1C1LP0DN25 315 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 IL7RP16871 459 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 PSMB5P28074 263 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 SLC6A12P48065 614 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 MANFP55145 182 aaKnown RBP10.95□□□□□ -0.66
CLK4-206ENST00000520878 ERVK-21P61565 698 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 HSPB3Q12988 150 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 TMEM31Q5JXX7 168 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 TICAM1Q8IUC6 712 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 EPHX4Q8IUS5 362 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 ZFP28Q8NHY6 868 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 RNF217Q8TC41 542 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 UBTD2Q8WUN7 234 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 THAP11Q96EK4 314 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 OR4K3Q96R72 315 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 MACROD1Q9BQ69 325 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 RPP25Q9BUL9 199 aaKnown RBP10.95□□□□□ -0.66
CLK4-206ENST00000520878 EFCAB11Q9BUY7 163 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 TOR3AQ9H497 397 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 LTB4R2Q9NPC1 389 aa10.95□□□□□ -0.66
CLK4-206ENST00000520878 PRSS16Q9NQE7 514 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms