RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 RBM41Q96IZ5 413 aaKnown RBP4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 NECTIN4Q96NY8 510 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 CDK19Q9BWU1 502 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 WDR13Q9H1Z4 485 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 TXLNGQ9NUQ3 528 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 ATAD3AQ9NVI7 634 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 MDFICQ9P1T7 246 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 CACNG5Q9UF02 275 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 ITGA11Q9UKX5 1188 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 ANGPTL3Q9Y5C1 460 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 A0A087WUV0 522 aaPredicted RBP4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 MEIOCA2RUB1 952 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 YDJCA8MPS7 323 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 SOCS5O75159 536 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 VTNP04004 478 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 SLC2A2P11168 524 aaPredicted RBP4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 KRT2P35908 639 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 CSNK2BP67870 215 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 KRT83P78385 493 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 MYL7Q01449 175 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 HYAL1Q12794 435 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 ITGA9Q13797 1035 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 NFE2L1Q14494 772 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 TMEM187Q14656 261 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 E2F5Q15329 346 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 MEP1BQ16820 701 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 GFI1BQ5VTD9 330 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 FAM46CQ5VWP2 391 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 TTC27Q6P3X3 843 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 KLHL7Q8IXQ5 586 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 DBF4BQ8NFT6 615 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 NCOA7Q8NI08 942 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 SMAP2Q8WU79 429 aaPredicted RBP4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 GATAD1Q8WUU5 269 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 METTL21AQ8WXB1 218 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 PARK7Q99497 189 aaKnown RBP4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 CDCA3Q99618 268 aaPredicted RBP4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 LPAR4Q99677 370 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 GPATCH1Q9BRR8 931 aaKnown RBP4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 FUCA2Q9BTY2 467 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 EGLN3Q9H6Z9 239 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 FGF22Q9HCT0 170 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 PLCXD1Q9NUJ7 323 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 CDH7Q9ULB5 785 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 WDR37Q9Y2I8 494 aa4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 ZFP37Q9Y6Q3 630 aaPredicted RBP4.48□□□□□ -1.69
HMGCS1-207ENST00000514610 A0A1W2PR80 420 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 SLCO1B7G3V0H7 640 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 H3BMM5 538 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 TEX28O15482 410 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 ZNF821O75541 412 aaPredicted RBP4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 KRT33AO76009 404 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 ZFAND5O76080 213 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 DLATP10515 647 aaKnown RBP4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 MT3P25713 68 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 SFTPDP35247 375 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 OR3A1P47881 315 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 ATP12AP54707 1039 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 SNRPD1P62314 119 aaKnown RBP4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 FOLH1Q04609 750 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 IL10RBQ08334 325 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 TRIM29Q14134 588 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 ZNF770Q6IQ21 691 aaPredicted RBP4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 HOGA1Q86XE5 327 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 CCDC60Q8IWA6 550 aaPredicted RBP4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 RAB42Q8N4Z0 105 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 ATAD1Q8NBU5 361 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 OR10G8Q8NGN5 311 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 NR4A3Q92570 626 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 SGF29Q96ES7 293 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 ZNF486Q96H40 463 aaPredicted RBP4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 AK8Q96MA6 479 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 PITPNM3Q9BZ71 974 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 FAM49AQ9H0Q0 323 aaPredicted RBP4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 P2RY12Q9H244 342 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 SEPT10Q9P0V9 454 aa4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 ARMCX3Q9UH62 379 aaPredicted RBP4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 HBS1LQ9Y450 684 aaKnown RBP4.47□□□□□ -1.69
HMGCS1-207ENST00000514610 IL16Q14005 1332 aa4.46□□□□□ -1.69
HMGCS1-207ENST00000514610 IGSF1Q8N6C5 1336 aa4.46□□□□□ -1.69
HMGCS1-207ENST00000514610 KIF26BQ2KJY2 2108 aa4.46□□□□□ -1.69
HMGCS1-207ENST00000514610 MYH14Q7Z406 1995 aaKnown RBP4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 TRBV4-1A0A0J9YWV2 114 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 TMEM150CB9EJG8 249 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 NME6O75414 186 aaPredicted RBP4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 CLDN1O95832 211 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 IGLV1-44P01699 117 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 C9P02748 559 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 HSP90AB1P08238 724 aaKnown RBP4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 SSTR1P30872 391 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 CETN2P41208 172 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 OR1D5P58170 312 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 TYSND1Q2T9J0 566 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 ZFP69Q49AA0 526 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 SPOUT1Q5T280 376 aaKnown RBP4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 PODNL1Q6PEZ8 512 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 Q6ZRP5 223 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 SLC24A5Q71RS6 500 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 PIWIL3Q7Z3Z3 882 aaKnown RBP4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 GPR141Q7Z602 305 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms