RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 MIPEPQ99797 713 aa10.91□□□□□ -0.66
RNF4-216ENST00000511859 FERMT1Q9BQL6 677 aa10.91□□□□□ -0.66
RNF4-216ENST00000511859 GORASP1Q9BQQ3 440 aa10.91□□□□□ -0.66
RNF4-216ENST00000511859 CLEC4MQ9H2X3 399 aaPredicted RBP10.91□□□□□ -0.66
RNF4-216ENST00000511859 MMP25Q9NPA2 562 aa10.91□□□□□ -0.66
RNF4-216ENST00000511859 RASSF1Q9NS23 344 aa10.91□□□□□ -0.66
RNF4-216ENST00000511859 RUVBL1Q9Y265 456 aaKnown RBP10.91□□□□□ -0.66
RNF4-216ENST00000511859 ALG6Q9Y672 507 aa10.91□□□□□ -0.66
RNF4-216ENST00000511859 HRNRQ86YZ3 2850 aaPredicted RBP10.91□□□□□ -0.66
RNF4-216ENST00000511859 SCN3AQ9NY46 2000 aa10.91□□□□□ -0.66
RNF4-216ENST00000511859 OR2A25A4D2G3 310 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 GABRR3A8MPY1 467 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 KIAA1324LA8MWY0 1029 aaPredicted RBP10.9□□□□□ -0.66
RNF4-216ENST00000511859 TXNDC9O14530 226 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 FOXS1O43638 330 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 NME2P1O60361 137 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 PRMT3O60678 531 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 HEXAP06865 529 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 NME2P22392 152 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 PEX19P40855 299 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 SLC1A1P43005 524 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 AGTR2P50052 363 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 CSE1LP55060 971 aaKnown RBP10.9□□□□□ -0.66
RNF4-216ENST00000511859 HSPA14Q0VDF9 509 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 PMPCAQ10713 525 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 KAZNQ674X7 775 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 DENND5AQ6IQ26 1287 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 ARHGAP11AQ6P4F7 1023 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 CXXC5Q7LFL8 322 aaKnown RBP10.9□□□□□ -0.66
RNF4-216ENST00000511859 TMEM139Q8IV31 216 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 CCDC71Q8IV32 467 aaPredicted RBP10.9□□□□□ -0.66
RNF4-216ENST00000511859 OR2A1Q8NGT9 310 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 SLC35G2Q8TBE7 412 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 STYXQ8WUJ0 223 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 PPP1R2P1Q96PQ5 205 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 QKIQ96PU8 341 aaKnown RBP eCLIP10.9□□□□□ -0.66
RNF4-216ENST00000511859 TTC1Q99614 292 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 NPAS2Q99743 824 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 BAG1Q99933 345 aaPredicted RBP10.9□□□□□ -0.66
RNF4-216ENST00000511859 TSSK1BQ9BXA7 367 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 VN1R1Q9GZP7 353 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 DRC3Q9H069 523 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 CIDEBQ9UHD4 219 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 NENFQ9UMX5 172 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 L3MBTL1Q9Y468 752 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 MRFAP1Q9Y605 127 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 ARID1AO14497 2285 aa10.9□□□□□ -0.66
RNF4-216ENST00000511859 FBN1P35555 2871 aaKnown RBP10.9□□□□□ -0.66
RNF4-216ENST00000511859 IGHV3-20A0A0C4DH32 117 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 TFECO14948 347 aaPredicted RBP10.9□□□□□ -0.67
RNF4-216ENST00000511859 GPC4O75487 556 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 SLC25A12O75746 678 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 TFEBP19484 476 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 CMPK1P30085 196 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 CCR7P32248 378 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 AVPR1BP47901 424 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 EFNA3P52797 238 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 TAS2R50P59544 299 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 SYT16Q17RD7 645 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 ASTE1Q2TB18 679 aaPredicted RBP10.9□□□□□ -0.67
RNF4-216ENST00000511859 ARSKQ6UWY0 536 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 RAD9BQ6WBX8 426 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 VRK3Q8IV63 474 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 CSNK1A1LQ8N752 337 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 TMEM125Q96AQ2 219 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 SEC16BQ96JE7 1060 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 PDLIM2Q96JY6 352 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 ALS2CR12Q96Q35 445 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 TBL1YQ9BQ87 522 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 GPATCH1Q9BRR8 931 aaKnown RBP10.9□□□□□ -0.67
RNF4-216ENST00000511859 DPH7Q9BTV6 452 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 CARD6Q9BX69 1037 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 PACSIN1Q9BY11 444 aa10.9□□□□□ -0.67
RNF4-216ENST00000511859 TRIM45Q9H8W5 580 aaPredicted RBP10.9□□□□□ -0.67
RNF4-216ENST00000511859 UTP6Q9NYH9 597 aaKnown RBP10.9□□□□□ -0.67
RNF4-216ENST00000511859 A0A0A6YYC8 382 aaPredicted RBP10.89□□□□□ -0.67
RNF4-216ENST00000511859 H0YIG0 161 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 KLRC4-KLRK1H3BQV0 150 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 I3L1I5 382 aaPredicted RBP10.89□□□□□ -0.67
RNF4-216ENST00000511859 NRP2O60462 931 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 MAN1A2O60476 641 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 APOA4P06727 396 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 PKMP14618 531 aaKnown RBP10.89□□□□□ -0.67
RNF4-216ENST00000511859 PSMA3P25788 255 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 MSNP26038 577 aaKnown RBP10.89□□□□□ -0.67
RNF4-216ENST00000511859 PSMB4P28070 264 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 PSMB5P28074 263 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 RBL1P28749 1068 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 HOXC12P31275 282 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 CYB561P49447 251 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 ST13P50502 369 aaKnown RBP10.89□□□□□ -0.67
RNF4-216ENST00000511859 DLX5P56178 289 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 NUP107P57740 925 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 PTK6Q13882 451 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 SLC18A3Q16572 532 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 NDUFA9Q16795 377 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 HKDC1Q2TB90 917 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 DEFB113Q30KQ7 82 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 ANKRD20A2Q5SQ80 823 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 MFSD4BQ5TF39 518 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms