RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 LINGO1Q96FE5 620 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 CFAP36Q96G28 342 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 PDLIM5Q96HC4 596 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 PRAP1Q96NZ9 151 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 KRT12Q99456 494 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 OLFM1Q99784 485 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 MESP1Q9BRJ9 268 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 MCMBPQ9BTE3 642 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 CRB3Q9BUF7 120 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 TRIM31Q9BZY9 425 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 TGIF2Q9GZN2 237 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 PCBD2Q9H0N5 130 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 ALG2Q9H553 416 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 SOX17Q9H6I2 414 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 CDC23Q9UJX2 597 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 CDC14AQ9UNH5 594 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 VWA7Q9Y334 891 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 PSAT1Q9Y617 370 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 SPTAN1Q13813 2472 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 RELNP78509 3460 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 TTLL8A6PVC2 850 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 PRPF4O43172 522 aaKnown RBP eCLIP8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 ALOX12BO75342 701 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 IPO13O94829 963 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 ALPPP05187 535 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 NPPBP16860 134 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 ZNF37AP17032 561 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 FBLP22087 321 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 CCND1P24385 295 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 EFNA3P52797 238 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 AP1S2P56377 157 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 IL2P60568 153 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 RPS15AP62244 130 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 CSNK1G2P78368 415 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 OCA2Q04671 838 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 MGAT5Q09328 741 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 Q0VFX4 171 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 PDIA2Q13087 525 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 NAE1Q13564 534 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 RBBP7Q16576 425 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 TUBB8Q3ZCM7 444 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 PRR30Q53SZ7 412 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 VWA2Q5GFL6 755 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 CRB2Q5IJ48 1285 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 THEMIS2Q5TEJ8 643 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 LCTLQ6UWM7 567 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 SBSNQ6UWP8 590 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 TMEM207Q6UWW9 146 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 ADCK2Q7Z695 626 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 LAPTM4BQ86VI4 370 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 SLC26A11Q86WA9 606 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 ZC3HC1Q86WB0 502 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 C17orf64Q86WR6 236 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 ANKMY2Q8IV38 441 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 PALM2Q8IXS6 379 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 GPATCH11Q8N954 259 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 GALNT11Q8NCW6 608 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 FBXO36Q8NEA4 188 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 OR56A3Q8NH54 315 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 CPT1CQ8TCG5 803 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 RERGQ96A58 199 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 COL26A1Q96A83 441 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 MIEF2Q96C03 454 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 TM4SF19Q96DZ7 209 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 THAP11Q96EK4 314 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 SARGQ9BW04 601 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 DRC3Q9H069 523 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 ATG10Q9H0Y0 220 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 ZBTB20Q9HC78 741 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 PPANQ9NQ55 473 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 ABCF3Q9NUQ8 709 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 C14orf105Q9NVL8 296 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 C3orf18Q9UK00 162 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 IKZF3Q9UKT9 509 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 SNX24Q9Y343 169 aa8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 MRPS2Q9Y399 296 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-209ENST00000506632 A0A0A6YYC8 382 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 FAM187AA6NFU0 413 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 IDSB3KWA1 339 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 I3L1I5 382 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 NDC80O14777 642 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 PCDH17O14917 1159 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 NSA2O95478 260 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 HPP00738 406 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 ENO2P09104 434 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 COX6A1P12074 109 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 CDH1P12830 882 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 ACPPP15309 386 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 ITGA3P26006 1051 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 BCL6P41182 706 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 UBAP2LQ14157 1087 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 INPP5JQ15735 1006 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 NDUFA9Q16795 377 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 PPP1R3AQ16821 1122 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 PLEKHN1Q494U1 663 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 DUPD1Q68J44 220 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 CAPN13Q6MZZ7 669 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 TMEM214Q6NUQ4 689 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 Q6ZS92 163 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 ATCAYQ86WG3 371 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms