RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 CBX5P45973 191 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 BRCC3P46736 316 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 KCNC3Q14003 757 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 EIF4HQ15056 248 aaKnown RBP17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 NR6A1Q15406 480 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 AP5B1Q2VPB7 878 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 MARC1Q5VT66 337 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 SAXO2Q658L1 398 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 LURAP1LQ8IV03 231 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 UMODL1-AS1Q8N2C9 162 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 GDPD1Q8N9F7 314 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 NUDT8Q8WV74 236 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 BTN2A2Q8WVV5 523 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 EMID1Q96A84 441 aaPredicted RBP17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 TESCQ96BS2 214 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 R3HDMLQ9H3Y0 253 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 KIF17Q9P2E2 1029 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 ATP6V1HQ9UI12 483 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 ABCG2Q9UNQ0 655 aa17.3■□□□□ 0.36
POLR2J3-209ENST00000504157 POLR2AP24928 1970 aaKnown RBP17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 MYBPHLA2RUH7 354 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 BTN3A3O00478 584 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 PLA2G10O15496 165 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 STSP08842 583 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 DSC2Q02487 901 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 C10orf62Q5T681 223 aaPredicted RBP17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 PLET1Q6UQ28 207 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 DLK2Q6UY11 383 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 RNF165Q6ZSG1 346 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 ZSWIM9Q86XI8 627 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 ZNF680Q8NEM1 530 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 TTLQ8NG68 377 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 TTPALQ9BTX7 342 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 EVA1BQ9NVM1 165 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 EIF2B4Q9UI10 523 aaKnown RBP17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 MYO1GB0I1T2 1018 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 E9PAM4 449 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 BTN3A1O00481 513 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 PROM1O43490 865 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 ZNF623O75123 536 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 FGF1P05230 155 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 ZNF286BP0CG31 522 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 HSMCR30P0CW71 290 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 HLA-DPA1P20036 260 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 WEE1P30291 646 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 RPS19P39019 145 aaKnown RBP17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 HTR6P50406 440 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 MAD2L1Q13257 205 aaPredicted RBP17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 CAMK2GQ13555 558 aaPredicted RBP17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 TP53BP2Q13625 1128 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 CACHD1Q5VU97 1274 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 FAM171A1Q5VUB5 890 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 TYW3Q6IPR3 259 aaKnown RBP17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 IL27RAQ6UWB1 636 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 KIAA1324Q6UXG2 1013 aaKnown RBP17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 APOBEC3FQ8IUX4 373 aaKnown RBP17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 OR8H3Q8N146 312 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 ATG16L2Q8NAA4 619 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 ARRDC2Q8TBH0 407 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 METTL6Q8TCB7 284 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 CPPED1Q9BRF8 314 aaPredicted RBP17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 GABARAPL3Q9BY60 117 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 AGO3Q9H9G7 860 aaKnown RBP17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 ZC4H2Q9NQZ6 224 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 UXTQ9UBK9 157 aaPredicted RBP17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 SAMD4AQ9UPU9 718 aaKnown RBP17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 CCL27Q9Y4X3 112 aa17.29■□□□□ 0.36
POLR2J3-209ENST00000504157 CIB4A0PJX0 185 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 ATG13O75143 517 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 RFPL3O75679 317 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 GPX5O75715 221 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 TSPAN12O95859 305 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 HK3P52790 923 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 RAB25P57735 213 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 MAXP61244 160 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 ITKQ08881 620 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 AANATQ16613 207 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 HKDC1Q2TB90 917 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 RFTN2Q52LD8 501 aaPredicted RBP17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 LRRC66Q68CR7 880 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 LINC00518Q8N0U6 118 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 CARNMT1Q8N4J0 409 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 OR52B6Q8NGF0 335 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 ZC3HAV1LQ96H79 300 aaKnown RBP17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 TSEN34Q9BSV6 310 aaKnown RBP17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 ASPNQ9BXN1 380 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 AMBNQ9NP70 447 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 ASIC5Q9NY37 505 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 CMAHPQ9Y471 501 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 SMLR1H3BR10 107 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 H3BRB1 525 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 TNFRSF21O75509 655 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 WDR47O94967 919 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 DARSP14868 501 aaKnown RBP17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 RPS3P23396 243 aaKnown RBP eCLIP17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 RORCP51449 518 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 SLC10A7Q0GE19 358 aa17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 DBPQ10586 325 aaPredicted RBP17.28■□□□□ 0.36
POLR2J3-209ENST00000504157 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms