RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 MED26O95402 600 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 CLDN1O95832 211 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 DDAH2O95865 285 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 HPP00738 406 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 HEXBP07686 556 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 ICAM2P13598 275 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 ACPPP15309 386 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 CCND1P24385 295 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 GABRB3P28472 473 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 GRK3P35626 688 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 DR1Q01658 176 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 DSG2Q14126 1118 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 MORF4L2Q15014 288 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 HKDC1Q2TB90 917 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 MSS51Q4VC12 460 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 HP1BP3Q5SSJ5 553 aaPredicted RBP11.37□□□□□ -0.59
MED28-203ENST00000503945 ZNF787Q6DD87 383 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 Q6ZS92 163 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 LRRC56Q8IYG6 542 aaPredicted RBP11.37□□□□□ -0.59
MED28-203ENST00000503945 ALKBH8Q96BT7 664 aaKnown RBP11.37□□□□□ -0.59
MED28-203ENST00000503945 THAP11Q96EK4 314 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 CAPZA3Q96KX2 299 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 TGIF2Q9GZN2 237 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 DRC3Q9H069 523 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 ZBTB20Q9HC78 741 aaPredicted RBP11.37□□□□□ -0.59
MED28-203ENST00000503945 MKKSQ9NPJ1 570 aaPredicted RBP11.37□□□□□ -0.59
MED28-203ENST00000503945 CCDC177Q9NQR7 707 aaPredicted RBP11.37□□□□□ -0.59
MED28-203ENST00000503945 PDE10AQ9Y233 779 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 MYO9AB2RTY4 2548 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 CENPEQ02224 2701 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 FER1L5A0AVI2 2057 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 A0A0A6YYC8 382 aaPredicted RBP11.36□□□□□ -0.59
MED28-203ENST00000503945 NSG1A0A0A6YYJ2 146 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 WIPF3A6NGB9 483 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 IDSB3KWA1 339 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 I3L1I5 382 aaPredicted RBP11.36□□□□□ -0.59
MED28-203ENST00000503945 PCDH17O14917 1159 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 ALOX12BO75342 701 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 IVDP26440 423 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 IMPA1P29218 277 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 ELK3P41970 407 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 RPS15AP62244 130 aaKnown RBP11.36□□□□□ -0.59
MED28-203ENST00000503945 TIAL1Q01085 375 aaKnown RBP eCLIP11.36□□□□□ -0.598e-7■□□□□ 8.1
MED28-203ENST00000503945 PDAP1Q13442 181 aaKnown RBP11.36□□□□□ -0.59
MED28-203ENST00000503945 NAE1Q13564 534 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 ELOAQ14241 798 aaKnown RBP11.36□□□□□ -0.59
MED28-203ENST00000503945 TEDDM1Q5T9Z0 273 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 CAPN13Q6MZZ7 669 aaPredicted RBP11.36□□□□□ -0.59
MED28-203ENST00000503945 AGTRAPQ6RW13 159 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 ISLR2Q6UXK2 745 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 GALNT7Q86SF2 657 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 C17orf64Q86WR6 236 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 CREG2Q8IUH2 290 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 IGDCC3Q8IVU1 814 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 CNTN4Q8IWV2 1026 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 KBTBD2Q8IY47 623 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 METTL21AQ8WXB1 218 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 LRRC39Q96DD0 335 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 CERS2Q96G23 380 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 CFAP36Q96G28 342 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 C10orf90Q96M02 699 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 FAM129AQ9BZQ8 928 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 ATG10Q9H0Y0 220 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 KCNF1Q9H3M0 494 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 EPS8L2Q9H6S3 715 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 ZNF160Q9HCG1 818 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 AGPAT4Q9NRZ5 378 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 C14orf105Q9NVL8 296 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 ASF1BQ9NVP2 202 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 RNF14Q9UBS8 474 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 ADAMTS6Q9UKP5 1117 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 CRYBG3Q68DQ2 2970 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 CELSR2Q9HCU4 2923 aa11.36□□□□□ -0.59
MED28-203ENST00000503945 H0YIG0 161 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 CCDC188H7C350 402 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 HAT1O14929 419 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 FOXS1O43638 330 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 BANF1O75531 89 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 WFS1O76024 890 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 CBX6O95503 412 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 NPPBP16860 134 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 DCTP40126 519 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 CDKN2DP55273 166 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 ARL4CP56559 192 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 SP140Q13342 867 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 TLR1Q15399 786 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 HIF1AQ16665 826 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 HECTD2Q5U5R9 776 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 FAAH2Q6GMR7 532 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 IGFL2Q6UWQ7 119 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 MAMDC2Q7Z304 686 aaPredicted RBP11.35□□□□□ -0.59
MED28-203ENST00000503945 PLD3Q8IV08 490 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 SPNS2Q8IVW8 549 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 GPATCH11Q8N954 259 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 CAMKVQ8NCB2 501 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 PPP4R1Q8TF05 950 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 C8orf44Q96CB5 159 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 LINGO1Q96FE5 620 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 WDR77Q9BQA1 342 aaPredicted RBP11.35□□□□□ -0.59
MED28-203ENST00000503945 HAUS8Q9BT25 410 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms