RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 VARSP26640 1264 aaKnown RBP14.96□□□□□ -0.01
HDAC4-213ENST00000496347 MLLT10P55197 1068 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 KLC1Q07866 573 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 CALCOCO2Q13137 446 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 RAPSNQ13702 412 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 FASTKD3Q14CZ7 662 aaKnown RBP14.96□□□□□ -0.01
HDAC4-213ENST00000496347 IGFBP7Q16270 282 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 NDUFA9Q16795 377 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 COLEC12Q5KU26 742 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 IRAK1BP1Q5VVH5 260 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 CAPN13Q6MZZ7 669 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-213ENST00000496347 KIRREL2Q6UWL6 708 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 IGFL3Q6UXB1 125 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 MBOAT1Q6ZNC8 495 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 ZC3HC1Q86WB0 502 aaKnown RBP14.96□□□□□ -0.01
HDAC4-213ENST00000496347 C17orf64Q86WR6 236 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 SPNS2Q8IVW8 549 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 EFCAB3Q8N7B9 438 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 RBMXL3Q8N7X1 1067 aaKnown RBP14.96□□□□□ -0.01
HDAC4-213ENST00000496347 AMER3Q8N944 861 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 FBXO36Q8NEA4 188 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 CPT1CQ8TCG5 803 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 ATL1Q8WXF7 558 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 PRAP1Q96NZ9 151 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 OLFM1Q99784 485 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 HAUS8Q9BT25 410 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 TRIM54Q9BYV2 358 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 MKKSQ9NPJ1 570 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-213ENST00000496347 ARL15Q9NXU5 204 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 MOCS1Q9NZB8 636 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 WHRNQ9P202 907 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 C3orf18Q9UK00 162 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 VWA7Q9Y334 891 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 MAP4K5Q9Y4K4 846 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 ESPL1Q14674 2120 aa14.96□□□□□ -0.01
HDAC4-213ENST00000496347 A0A1W2PQ72 361 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 MAP2K7O14733 419 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 ITGA3P26006 1051 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 SLC26A3P40879 764 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 LCTLQ6UWM7 567 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 SHISA6Q6ZSJ9 500 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 MAATS1Q7Z4T9 603 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 ANKMY2Q8IV38 441 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 TMEM151BQ8IW70 566 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 ZBED8Q8IZ13 594 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 GALNT11Q8NCW6 608 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 SPATA4Q8NEY3 305 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 OR11G2Q8NGC1 345 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 ANKRD7Q92527 254 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 PDLIM5Q96HC4 596 aaKnown RBP14.95□□□□□ -0.02
HDAC4-213ENST00000496347 PHACTR1Q9C0D0 580 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 TGIF2Q9GZN2 237 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 ZNF552Q9H707 407 aaPredicted RBP14.95□□□□□ -0.02
HDAC4-213ENST00000496347 TRPC4Q9UBN4 977 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 NOVA2Q9UNW9 492 aaKnown RBP14.95□□□□□ -0.02
HDAC4-213ENST00000496347 B3GNT3Q9Y2A9 372 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 SNX24Q9Y343 169 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 PSAT1Q9Y617 370 aa14.95□□□□□ -0.02
HDAC4-213ENST00000496347 H0YIG0 161 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 EIF3HO15372 352 aaKnown RBP eCLIP14.94□□□□□ -0.02
HDAC4-213ENST00000496347 HPP00738 406 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 CYC1P08574 325 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 GRK3P35626 688 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 ETF1P62495 437 aaKnown RBP14.94□□□□□ -0.02
HDAC4-213ENST00000496347 CSNK1G2P78368 415 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 NAE1Q13564 534 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 DUPD1Q68J44 220 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 SBSNQ6UWP8 590 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 VN1R4Q7Z5H5 301 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 STRA8Q7Z7C7 330 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 Q8NA96 180 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 ABHD11Q8NFV4 315 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 OR56A3Q8NH54 315 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 FBXL8Q96CD0 374 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 MMABQ96EY8 250 aaPredicted RBP14.94□□□□□ -0.02
HDAC4-213ENST00000496347 ERP44Q9BS26 406 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 ATG10Q9H0Y0 220 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 RHOJQ9H4E5 214 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 POPDC3Q9HBV1 291 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 SLAMF7Q9NQ25 335 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 SH2B3Q9UQQ2 575 aa14.94□□□□□ -0.02
HDAC4-213ENST00000496347 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.94□□□□□ -0.02
HDAC4-213ENST00000496347 NAV2Q8IVL1 2488 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 CPAMD8Q8IZJ3 1885 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 FAM95CA0A1B0GW59 222 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 CLEC18AA5D8T8 446 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 IDSB3KWA1 339 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 FOXS1O43638 330 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 VPS4BO75351 444 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 NSA2O95478 260 aaKnown RBP14.93□□□□□ -0.02
HDAC4-213ENST00000496347 SLC35G6P0C7Q6 338 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 CDH1P12830 882 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 AVPR1BP47901 424 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 PPP1R3AQ16821 1122 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 AGAP7PQ5VUJ5 663 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 TMEM214Q6NUQ4 689 aaKnown RBP14.93□□□□□ -0.02
HDAC4-213ENST00000496347 CLEC18BQ6UXF7 455 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 PLD3Q8IV08 490 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 IQCKQ8N0W5 287 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 NKAPQ8N5F7 415 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms