RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 VPS50Q96JG6 964 aa8.4□□□□□ -1.06
SORT1-208ENST00000495777 ZNF778Q96MU6 729 aa8.4□□□□□ -1.06
SORT1-208ENST00000495777 CPNE1Q99829 537 aa8.4□□□□□ -1.06
SORT1-208ENST00000495777 ROPN1BQ9BZX4 212 aaPredicted RBP8.4□□□□□ -1.06
SORT1-208ENST00000495777 CCDC68Q9H2F9 335 aa8.4□□□□□ -1.06
SORT1-208ENST00000495777 ACBD3Q9H3P7 528 aa8.4□□□□□ -1.06
SORT1-208ENST00000495777 ROPN1Q9HAT0 212 aaPredicted RBP8.4□□□□□ -1.06
SORT1-208ENST00000495777 INTS7Q9NVH2 962 aaKnown RBP8.4□□□□□ -1.06
SORT1-208ENST00000495777 CROCCQ5TZA2 2017 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 IGLV3-12A0A075B6K2 115 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 EXOC1LA0A1B0GW35 172 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 ARHGAP10A1A4S6 786 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 FAM159BA6NKW6 160 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 TARM1B6A8C7 271 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 RASGRF2O14827 1237 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 PCDH17O14917 1159 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 KPNA5O15131 536 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 SRPX2O60687 465 aaPredicted RBP8.39□□□□□ -1.07
SORT1-208ENST00000495777 CTSVO60911 334 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 NDUFS3O75489 264 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 KRT38O76015 456 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 KLHL18O94889 574 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 SLCO2B1O94956 709 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 MED26O95402 600 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 ACSL3O95573 720 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 HPP00738 406 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 ESR1P03372 595 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 RPN2P04844 631 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 INHBAP08476 426 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 MYBL2P10244 700 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 H2AFXP16104 143 aaPredicted RBP8.39□□□□□ -1.07
SORT1-208ENST00000495777 RPS3P23396 243 aaKnown RBP eCLIP8.39□□□□□ -1.07
SORT1-208ENST00000495777 SSTR1P30872 391 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 SOX11P35716 441 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 GP5P40197 560 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 OR1D4P47884 311 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 ART3Q13508 389 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 INAQ16352 499 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 RBBP7Q16576 425 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 FAM214AQ32MH5 1076 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 HSP90AA5PQ58FG0 334 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 ATG9BQ674R7 924 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 SP5Q6BEB4 398 aaPredicted RBP8.39□□□□□ -1.07
SORT1-208ENST00000495777 FIGLAQ6QHK4 219 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 FAM180AQ6UWF9 173 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 SHISA6Q6ZSJ9 500 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 IGDCC3Q8IVU1 814 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 BCORP1Q8N888 145 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 LMNTD1Q8N9Z9 388 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 TTC29Q8NA56 475 aaPredicted RBP8.39□□□□□ -1.07
SORT1-208ENST00000495777 C2CD4AQ8NCU7 369 aaPredicted RBP8.39□□□□□ -1.07
SORT1-208ENST00000495777 HMGCLL1Q8TB92 370 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 FBF1Q8TES7 1133 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 ASZ1Q8WWH4 475 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 PSMF1Q92530 271 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 ZUFSPQ96AP4 578 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 MTBPQ96DY7 904 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 THOC3Q96J01 351 aaKnown RBP8.39□□□□□ -1.07
SORT1-208ENST00000495777 CNDP1Q96KN2 507 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 PWWP2AQ96N64 755 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 IL17FQ96PD4 163 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 PANX3Q96QZ0 392 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 SELENOSQ9BQE4 189 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 MESP1Q9BRJ9 268 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 WDR83Q9BRX9 315 aaKnown RBP8.39□□□□□ -1.07
SORT1-208ENST00000495777 UNKQ9C0B0 810 aaKnown RBP8.39□□□□□ -1.07
SORT1-208ENST00000495777 SOX17Q9H6I2 414 aaPredicted RBP8.39□□□□□ -1.07
SORT1-208ENST00000495777 VIPAS39Q9H9C1 493 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 OLAHQ9NV23 265 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 SLC2A6Q9UGQ3 507 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 GNPTGQ9UJJ9 305 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 ZNF180Q9UJW8 692 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 FBXO5Q9UKT4 447 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 KLF2Q9Y5W3 355 aaPredicted RBP8.39□□□□□ -1.07
SORT1-208ENST00000495777 PDZD2O15018 2839 aa8.39□□□□□ -1.07
SORT1-208ENST00000495777 DYNC1I1O14576 645 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 PRMT5O14744 637 aaPredicted RBP8.38□□□□□ -1.07
SORT1-208ENST00000495777 CDH16O75309 829 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 BANF1O75531 89 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 JRKO75564 520 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 ZGLP1P0C6A0 271 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 FAM153BP0C7A2 387 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 ACPPP15309 386 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 FDXRP22570 491 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 ARNTP27540 789 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 AOAHP28039 575 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 ATP5DP30049 168 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 SPRP35270 261 aaPredicted RBP8.38□□□□□ -1.07
SORT1-208ENST00000495777 HSD17B3P37058 310 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 GRIA3P42263 894 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 SKIV2L2P42285 1042 aaKnown RBP8.38□□□□□ -1.07
SORT1-208ENST00000495777 MSH2P43246 934 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 GPX6P59796 221 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 KLC1Q07866 573 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 IFFO1Q0D2I5 559 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 HSPA14Q0VDF9 509 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 SLC29A2Q14542 456 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 SEMA3AQ14563 771 aa8.38□□□□□ -1.07
SORT1-208ENST00000495777 SF1Q15637 639 aaKnown RBP8.38□□□□□ -1.07
SORT1-208ENST00000495777 KBTBD12Q3ZCT8 623 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms