RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 IL23RQ5VWK5 629 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 PAOXQ6QHF9 649 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 ZC3HC1Q86WB0 502 aaKnown RBP9.09□□□□□ -0.95
BRCA1-219ENST00000491747 LKAAEAR1Q8TD35 194 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 TRPC4APQ8TEL6 797 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 JPH3Q8WXH2 748 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-219ENST00000491747 ATP6V1E2Q96A05 226 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 PPP1R14BQ96C90 147 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 MAELQ96JY0 434 aaKnown RBP9.09□□□□□ -0.95
BRCA1-219ENST00000491747 NPAS2Q99743 824 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 NRSN2Q9GZP1 204 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 SATB2Q9UPW6 733 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 RUVBL2Q9Y230 463 aaKnown RBP9.09□□□□□ -0.95
BRCA1-219ENST00000491747 ACOT9Q9Y305 439 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 KNTC1P50748 2209 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 A0A0J9YVX5 310 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 MYOCOSA0A1B0GUC4 107 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 C17orf113A0A1B0GUU1 675 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 IQCF5A8MTL0 148 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 H3BSA7 217 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 PHGDHO43175 533 aaKnown RBP9.09□□□□□ -0.95
BRCA1-219ENST00000491747 NPHS1O60500 1241 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 AP2A2O94973 939 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 CPNE6O95741 557 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 VIPP01282 170 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 SBK3P0C264 359 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 SLC35E2BP0CK96 405 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 CCR10P46092 362 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 PREPP48147 710 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 CDK9P50750 372 aaKnown RBP9.09□□□□□ -0.95
BRCA1-219ENST00000491747 PSME3P61289 254 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 TUBA4AP68366 448 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 SQSTM1Q13501 440 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 GPR18Q14330 331 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 C3orf38Q5JPI3 329 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 LYPLAL1Q5VWZ2 237 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 LRRC8EQ6NSJ5 796 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 CERS6Q6ZMG9 384 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 TMEM26Q6ZUK4 368 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 PIWIL4Q7Z3Z4 852 aaKnown RBP9.09□□□□□ -0.95
BRCA1-219ENST00000491747 PIM3Q86V86 326 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 AFAP1L2Q8N4X5 818 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 KDF1Q8NAX2 398 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-219ENST00000491747 HM13Q8TCT9 377 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 MOCOSQ96EN8 888 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 NRTNQ99748 197 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 OR52A5Q9H2C5 316 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 PNPLA3Q9NST1 481 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 XPR1Q9UBH6 696 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 MYRFQ9Y2G1 1151 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 ADAMTS20P59510 1910 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 DMXL2Q8TDJ6 3036 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 IGHV5-10-1A0A0J9YXX1 117 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 STAMBPO95630 424 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 JUNP05412 331 aaKnown RBP9.08□□□□□ -0.96
BRCA1-219ENST00000491747 HGFP14210 728 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 ITGB6P18564 788 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 MAPK9P45984 424 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 KPNA2P52292 529 aaKnown RBP9.08□□□□□ -0.96
BRCA1-219ENST00000491747 TRAP1Q12931 704 aaKnown RBP9.08□□□□□ -0.96
BRCA1-219ENST00000491747 ZNF789Q5FWF6 425 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 KIAA0930Q6ICG6 404 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-219ENST00000491747 CARM1Q86X55 608 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 SPNS2Q8IVW8 549 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 LSMEM2Q8N112 164 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 CCNYL1Q8N7R7 359 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 FAM156AQ8NDB6 213 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 RCBTB1Q8NDN9 531 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 ACVR1CQ8NER5 493 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 KCTD4Q8WVF5 259 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.08□□□□□ -0.96
BRCA1-219ENST00000491747 CXorf40BQ96DE9 158 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 RMND5BQ96G75 393 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-219ENST00000491747 MARK4Q96L34 752 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 C12orf66Q96MD2 445 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 TMEM79Q9BSE2 394 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 P2RY12Q9H244 342 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 CCDC86Q9H6F5 360 aaKnown RBP9.08□□□□□ -0.96
BRCA1-219ENST00000491747 COQ10BQ9H8M1 238 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 SPAG4Q9NPE6 437 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 ACSS2Q9NR19 701 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 POT1Q9NUX5 634 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 ACSL5Q9ULC5 683 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 PCDHGA7Q9Y5G6 932 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 hCG_2014768A0A024R1R8 64 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 TARM1B6A8C7 271 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 BRINP1O60477 761 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 DLX3O60479 287 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 MTHFD1P11586 935 aaKnown RBP9.08□□□□□ -0.96
BRCA1-219ENST00000491747 STMN1P16949 149 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 TYRP1P17643 537 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 CCKBRP32239 447 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 CCR7P32248 378 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 HALP42357 657 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 RAB10P61026 200 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 GABREP78334 506 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 GPLD1P80108 840 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 PDAP1Q13442 181 aaKnown RBP9.08□□□□□ -0.96
BRCA1-219ENST00000491747 C16orf72Q14CZ0 275 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 CROCCP3Q8IVE0 287 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms