RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 MRPS2Q9Y399 296 aaKnown RBP23.78■■□□□ 1.4
HMGN1-217ENST00000489072 IGLV3-12A0A075B6K2 115 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 FFAR3O14843 346 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 GPR42O15529 346 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 ALOX12BO75342 701 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 ZGLP1P0C6A0 271 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 NPPBP16860 134 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 MLLT10P55197 1068 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 AP1S2P56377 157 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 KLC1Q07866 573 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 DSG2Q14126 1118 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 VWA2Q5GFL6 755 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 KIRREL2Q6UWL6 708 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 LCTLQ6UWM7 567 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 SBSNQ6UWP8 590 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 ZNF572Q7Z3I7 529 aaPredicted RBP23.77■■□□□ 1.4
HMGN1-217ENST00000489072 C17orf64Q86WR6 236 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 AMER3Q8N944 861 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 PYCR2Q96C36 320 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 MVB12AQ96EY5 273 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 G3BP2Q9UN86 482 aaKnown RBP23.77■■□□□ 1.4
HMGN1-217ENST00000489072 SCN3AQ9NY46 2000 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 CNTRLQ7Z7A1 2325 aa23.77■■□□□ 1.4
HMGN1-217ENST00000489072 CXorf49A8MYA2 514 aaPredicted RBP23.76■■□□□ 1.39
HMGN1-217ENST00000489072 EIF3HO15372 352 aaKnown RBP eCLIP23.76■■□□□ 1.39
HMGN1-217ENST00000489072 CDH1P12830 882 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 CCND1P24385 295 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 RPS15AP62244 130 aaKnown RBP23.76■■□□□ 1.39
HMGN1-217ENST00000489072 OCA2Q04671 838 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 MYBPC3Q14896 1274 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 TRADDQ15628 312 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 PPP1R3AQ16821 1122 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 CEP97Q8IW35 865 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 OR56A3Q8NH54 315 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 MIEF2Q96C03 454 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 FBXL8Q96CD0 374 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 CRB3Q9BUF7 120 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 RHOJQ9H4E5 214 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 ATP13A2Q9NQ11 1180 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 SEMA3GQ9NS98 782 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 NSMCE4AQ9NXX6 385 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 CDC14AQ9UNH5 594 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 PLAAQ9Y263 795 aa23.76■■□□□ 1.39
HMGN1-217ENST00000489072 KCNE1BA0A087WTH5 132 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 A0A0A6YYC8 382 aaPredicted RBP23.75■■□□□ 1.39
HMGN1-217ENST00000489072 FEZF1A0PJY2 475 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 I3L1I5 382 aaPredicted RBP23.75■■□□□ 1.39
HMGN1-217ENST00000489072 TXNDC9O14530 226 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 GUCA1CO95843 209 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 SLC26A3P40879 764 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 SOX8P57073 446 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 RBBP7Q16576 425 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 VWA5B1Q5TIE3 1220 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 CAPN13Q6MZZ7 669 aaPredicted RBP23.75■■□□□ 1.39
HMGN1-217ENST00000489072 LAPTM4BQ86VI4 370 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 RBMXL3Q8N7X1 1067 aaKnown RBP23.75■■□□□ 1.39
HMGN1-217ENST00000489072 ANKRD49Q8WVL7 239 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 MIB2Q96AX9 1013 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 MMABQ96EY8 250 aaPredicted RBP23.75■■□□□ 1.39
HMGN1-217ENST00000489072 VPS39Q96JC1 886 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 OR4K3Q96R72 315 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 MACROD1Q9BQ69 325 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 MFRPQ9BY79 579 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 TRIM54Q9BYV2 358 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 DRC3Q9H069 523 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 ZNF552Q9H707 407 aaPredicted RBP23.75■■□□□ 1.39
HMGN1-217ENST00000489072 TRPC4Q9UBN4 977 aa23.75■■□□□ 1.39
HMGN1-217ENST00000489072 UTP11Q9Y3A2 253 aaKnown RBP23.75■■□□□ 1.39
HMGN1-217ENST00000489072 LRRK2Q5S007 2527 aa23.74■■□□□ 1.39
HMGN1-217ENST00000489072 SHANK1Q9Y566 2161 aa23.74■■□□□ 1.39
HMGN1-217ENST00000489072 NPEPPSL1A6NEC2 478 aa23.74■■□□□ 1.39
HMGN1-217ENST00000489072 CDC7O00311 574 aa23.74■■□□□ 1.39
HMGN1-217ENST00000489072 LCMT2O60294 686 aaKnown RBP23.74■■□□□ 1.39
HMGN1-217ENST00000489072 DPM1O60762 260 aa23.74■■□□□ 1.39
HMGN1-217ENST00000489072 ENO2P09104 434 aaPredicted RBP23.74■■□□□ 1.39
HMGN1-217ENST00000489072 BCL6P41182 706 aa23.74■■□□□ 1.39
HMGN1-217ENST00000489072 PLTPP55058 493 aa23.74■■□□□ 1.39
HMGN1-217ENST00000489072 NKAPQ8N5F7 415 aaKnown RBP23.74■■□□□ 1.39
HMGN1-217ENST00000489072 OR11G2Q8NGC1 345 aa23.74■■□□□ 1.39
HMGN1-217ENST00000489072 C3orf18Q9UK00 162 aa23.74■■□□□ 1.39
HMGN1-217ENST00000489072 NOVA2Q9UNW9 492 aaKnown RBP23.74■■□□□ 1.39
HMGN1-217ENST00000489072 PTPN13Q12923 2485 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 HECTD1Q9ULT8 2610 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 PABPN1LA6NDY0 278 aaKnown RBP23.73■■□□□ 1.39
HMGN1-217ENST00000489072 SORBS2O94875 1100 aaKnown RBP23.73■■□□□ 1.39
HMGN1-217ENST00000489072 C1QAP02745 245 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 CD97P48960 835 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 GPX6P59796 221 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 AIMP2Q13155 320 aaKnown RBP23.73■■□□□ 1.39
HMGN1-217ENST00000489072 FAM53BQ14153 422 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 SYT16Q17RD7 645 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 JMJD6Q6NYC1 403 aaPredicted RBP23.73■■□□□ 1.39
HMGN1-217ENST00000489072 ZDHHC24Q6UX98 284 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 HPS6Q86YV9 775 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 FBXO25Q8TCJ0 367 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 TM4SF19Q96DZ7 209 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 THAP11Q96EK4 314 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 HAUS8Q9BT25 410 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 YIPF2Q9BWQ6 316 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 LUZP4Q9P127 313 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms