RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 BAIAP2L2Q6UXY1 529 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 SLC24A5Q71RS6 500 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 MPP4Q96JB8 637 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 PSMB7Q99436 277 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 SEPHS2Q99611 448 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 NLGN3Q9NZ94 848 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 RPS6KL1Q9Y6S9 549 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 IGSF1Q8N6C5 1336 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 A6NCN8 305 aa3.06□□□□□ -1.92
SMC4-219ENST00000487747 OGTO15294 1046 aa3.06□□□□□ -1.92
SMC4-219ENST00000487747 MATR3P43243 847 aaKnown RBP eCLIP3.06□□□□□ -1.92
SMC4-219ENST00000487747 RASGEF1BQ0VAM2 473 aa3.06□□□□□ -1.92
SMC4-219ENST00000487747 GPC2Q8N158 579 aa3.06□□□□□ -1.92
SMC4-219ENST00000487747 PARP8Q8N3A8 854 aa3.06□□□□□ -1.92
SMC4-219ENST00000487747 MINDY1Q8N5J2 469 aa3.06□□□□□ -1.92
SMC4-219ENST00000487747 LRTM2Q8N967 370 aa3.06□□□□□ -1.92
SMC4-219ENST00000487747 TDRD5Q8NAT2 981 aaKnown RBP3.06□□□□□ -1.92
SMC4-219ENST00000487747 CSNK1G2-AS1Q8NCQ2 148 aa3.06□□□□□ -1.92
SMC4-219ENST00000487747 SPPL2AQ8TCT8 520 aa3.06□□□□□ -1.92
SMC4-219ENST00000487747 MRAPQ8TCY5 172 aa3.06□□□□□ -1.92
SMC4-219ENST00000487747 METTL21AQ8WXB1 218 aa3.06□□□□□ -1.92
SMC4-219ENST00000487747 KLHL5Q96PQ7 755 aa3.06□□□□□ -1.92
SMC4-219ENST00000487747 PANK2Q9BZ23 570 aa3.06□□□□□ -1.92
SMC4-219ENST00000487747 GDE1Q9NZC3 331 aa3.06□□□□□ -1.92
SMC4-219ENST00000487747 ZNF581Q9P0T4 197 aa3.06□□□□□ -1.92
SMC4-219ENST00000487747 ELF5Q9UKW6 265 aaPredicted RBP3.06□□□□□ -1.92
SMC4-219ENST00000487747 LOC100509620A0A075B734 347 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 SRRM4A7MD48 611 aaKnown RBP3.05□□□□□ -1.92
SMC4-219ENST00000487747 ARHGEF33A8MVX0 844 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 TRIM77I1YAP6 450 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 RTCAO00442 366 aaKnown RBP3.05□□□□□ -1.92
SMC4-219ENST00000487747 ACSL3O95573 720 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 RENP00797 406 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 EDNRAP25101 427 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 HOXD13P35453 343 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 DRD3P35462 400 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 NDST2P52849 883 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 OR1D5P58170 312 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 LYZP61626 148 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 DDX10Q13206 875 aaKnown RBP3.05□□□□□ -1.92
SMC4-219ENST00000487747 C15orf59Q2T9L4 293 aaPredicted RBP3.05□□□□□ -1.92
SMC4-219ENST00000487747 MAATS1Q7Z4T9 603 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 TCEANCQ8N8B7 351 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 C4orf32Q8N8J7 132 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 ROBO4Q8WZ75 1007 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 PTERQ96BW5 349 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 TMCO6Q96DC7 493 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 CDCA3Q99618 268 aaPredicted RBP3.05□□□□□ -1.92
SMC4-219ENST00000487747 STK26Q9P289 416 aa3.05□□□□□ -1.92
SMC4-219ENST00000487747 SLC1A7O00341 560 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 TRAFD1O14545 582 aaPredicted RBP3.04□□□□□ -1.92
SMC4-219ENST00000487747 BAIAP3O94812 1187 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 CYP11B2P19099 503 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 CD22P20273 847 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 CAPN3P20807 821 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 AADACP22760 399 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 LHX1P48742 406 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 ZNF75DP51815 510 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 NAP1L1P55209 391 aaKnown RBP3.04□□□□□ -1.92
SMC4-219ENST00000487747 CLDN15P56746 228 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 ITPK1Q13572 414 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 CUL3Q13618 768 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 RFTN1Q14699 578 aaPredicted RBP3.04□□□□□ -1.92
SMC4-219ENST00000487747 SIX1Q15475 284 aaPredicted RBP3.04□□□□□ -1.92
SMC4-219ENST00000487747 LEMD1Q68G75 181 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 C1orf122Q6ZSJ8 110 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 RAPH1Q70E73 1250 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 OR4D10Q8NGI6 311 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 OR4Q3Q8NH05 313 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 SERAC1Q96JX3 654 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 ZNF830Q96NB3 372 aaPredicted RBP3.04□□□□□ -1.92
SMC4-219ENST00000487747 PRRG4Q9BZD6 226 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 GHITMQ9H3K2 345 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 IL1RAPQ9NPH3 570 aa3.04□□□□□ -1.92
SMC4-219ENST00000487747 NEDD4P46934 1319 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 RPL37AP8A6NKH3 93 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 A8MV72 311 aaPredicted RBP3.03□□□□□ -1.92
SMC4-219ENST00000487747 PTGESO14684 152 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 VENTXO95231 258 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 LINGO3P0C6S8 592 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 CSH1P0DML2 217 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 CSH2P0DML3 217 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 FDPSP14324 419 aaKnown RBP3.03□□□□□ -1.92
SMC4-219ENST00000487747 GSK3BP49841 420 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 CCR3P51677 355 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 KIAA0141Q14154 515 aaPredicted RBP3.03□□□□□ -1.92
SMC4-219ENST00000487747 OPCMLQ14982 345 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 C9orf66Q5T8R8 295 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 C6orf163Q5TEZ5 329 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 AGAP7PQ5VUJ5 663 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 CATSPER3Q86XQ3 398 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 APPL2Q8NEU8 664 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 AGAP11Q8TF27 550 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 NEDD4LQ96PU5 975 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 YTHDF1Q9BYJ9 559 aaKnown RBP3.03□□□□□ -1.92
SMC4-219ENST00000487747 CDH20Q9HBT6 801 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 OLAHQ9NV23 265 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 HAUS2Q9NVX0 235 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 HAO2Q9NYQ3 351 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms