RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 IMPDH1P20839 514 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 EEF1DP29692 281 aaKnown RBP11.17□□□□□ -0.62
HPS4-212ENST00000481910 CASP2P42575 452 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 CAPZBP47756 277 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 PRKAA2P54646 552 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 MTTPP55157 894 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 RIPK1Q13546 671 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 KIR2DS3Q14952 304 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 PCLAFQ15004 111 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 SF1Q15637 639 aaKnown RBP11.17□□□□□ -0.62
HPS4-212ENST00000481910 GKAP1Q5VSY0 366 aaPredicted RBP11.17□□□□□ -0.62
HPS4-212ENST00000481910 FCRLBQ6BAA4 426 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 TUBA3EQ6PEY2 450 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 SLC2A7Q6PXP3 512 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 THOC6Q86W42 341 aaKnown RBP11.17□□□□□ -0.62
HPS4-212ENST00000481910 C10orf107Q8IVU9 208 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 FAM20CQ8IXL6 584 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 MDM1Q8TC05 714 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 MIPEPQ99797 713 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 MECRQ9BV79 373 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 LRRN3Q9H3W5 708 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 SYNDIG1Q9H7V2 258 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 ACTR10Q9NZ32 417 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 TAC3Q9UHF0 121 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 CDV3Q9UKY7 258 aaKnown RBP11.17□□□□□ -0.62
HPS4-212ENST00000481910 ASB1Q9Y576 335 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 PCDHB11Q9Y5F2 797 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 A0A1W2PPV9 198 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 A0A1W2PQM1 296 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 WDR91A4D1P6 747 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 LRRC14BA6NHZ5 514 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 MATN2O00339 956 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 NVLO15381 856 aaKnown RBP11.16□□□□□ -0.62
HPS4-212ENST00000481910 CAPN5O15484 640 aaPredicted RBP11.16□□□□□ -0.62
HPS4-212ENST00000481910 TRIM13O60858 407 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 DHRS4L1P0CG22 281 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 NPPBP16860 134 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 PSMB5P28074 263 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 SLC6A12P48065 614 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 CENPAP49450 140 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 HERVK_113P63132 956 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 NFKB2Q00653 900 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 PCBP2Q15366 365 aaKnown RBP eCLIP11.16□□□□□ -0.62
HPS4-212ENST00000481910 ARMC4Q5T2S8 1044 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 NUDCD3Q8IVD9 361 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 OR2A1Q8NGT9 310 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 UBTD2Q8WUN7 234 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 SGPP1Q9BX95 441 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 ERVK-6Q9BXR3 956 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 PCBD2Q9H0N5 130 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 NPDC1Q9NQX5 325 aaPredicted RBP11.16□□□□□ -0.62
HPS4-212ENST00000481910 OPTCQ9UBM4 332 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 ANGPTL3Q9Y5C1 460 aa11.16□□□□□ -0.62
HPS4-212ENST00000481910 SLC30A4O14863 429 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 TM4SF5O14894 197 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 MAP3K7O43318 606 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 PRICKLE3O43900 615 aaPredicted RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 SUPT7LO94864 414 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 CPNE6O95741 557 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 BPGMP07738 259 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 UGT2B7P16662 529 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 CSRP1P21291 193 aaKnown RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 PRDX3P30048 256 aaKnown RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 PEBP1P30086 187 aaKnown RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 WDR4P57081 412 aaKnown RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 PPP1CAP62136 330 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 CFHR1Q03591 330 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 KLC1Q07866 573 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 TRAP1Q12931 704 aaKnown RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 ILKQ13418 452 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 SQSTM1Q13501 440 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 CMPK2Q5EBM0 449 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 PRAMEF13Q5VWM6 474 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 LIPMQ5VYY2 423 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 WDR74Q6RFH5 385 aaPredicted RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 GLRX5Q86SX6 157 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 PLXDC1Q8IUK5 500 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 CCNYL1Q8N7R7 359 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 TOR1AIP2Q8NFQ8 470 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 PPP4R1Q8TF05 950 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 ITPKCQ96DU7 683 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 MOCOSQ96EN8 888 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 ZDHHC12Q96GR4 267 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 TGM7Q96PF1 710 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 TMEM237Q96Q45 408 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 OR2A14Q96R47 310 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 OR4K3Q96R72 315 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 GFM1Q96RP9 751 aaKnown RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 PRPF18Q99633 342 aaKnown RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 RAB33BQ9H082 229 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 ACSS2Q9NR19 701 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 DNAJC11Q9NVH1 559 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 KLHL3Q9UH77 587 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 ATXN7L1Q9ULK2 861 aaPredicted RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 KCNE2Q9Y6J6 123 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 HNRNPCL2B2RXH8 293 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 K7EPI3 171 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 E2F3O00716 465 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 CASQ2O14958 399 aaPredicted RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 HNRNPCL1O60812 293 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms