RNA–Protein interactions for RNA: ENST00000478677.1

AGRN-207, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 276 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-207ENST00000478677 NIPSNAP2O75323 286 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 PSIP1O75475 530 aaKnown RBP11.37□□□□□ -0.59
AGRN-207ENST00000478677 C8orf89P0DMQ9 161 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 ETS1P14921 441 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 RPS3P23396 243 aaKnown RBP eCLIP11.37□□□□□ -0.591e-14■□□□□ 8.8
AGRN-207ENST00000478677 MSX1P28360 303 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 TNNT3P45378 269 aaPredicted RBP11.37□□□□□ -0.59
AGRN-207ENST00000478677 TAP2Q03519 686 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 RELAQ04206 551 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 PRPSAP1Q14558 356 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 CMPK2Q5EBM0 449 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 ACSBG2Q5FVE4 666 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 ABHD17BQ5VST6 288 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 CPEB2Q7Z5Q1 589 aaKnown RBP11.37□□□□□ -0.59
AGRN-207ENST00000478677 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.37□□□□□ -0.59
AGRN-207ENST00000478677 PCGF5Q86SE9 256 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 KRTAP1-3Q8IUG1 177 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 DMRTC2Q8IXT2 367 aaPredicted RBP11.37□□□□□ -0.59
AGRN-207ENST00000478677 ELP5Q8TE02 316 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 ATG4AQ8WYN0 398 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 LPGAT1Q92604 370 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 TM4SF19Q96DZ7 209 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 MMABQ96EY8 250 aaPredicted RBP11.37□□□□□ -0.59
AGRN-207ENST00000478677 CABS1Q96KC9 395 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 PKP4Q99569 1192 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 VKORC1Q9BQB6 163 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 ETNK1Q9HBU6 452 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 CHRAC1Q9NRG0 131 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 INTS7Q9NVH2 962 aaKnown RBP11.37□□□□□ -0.59
AGRN-207ENST00000478677 ZNF358Q9NW07 568 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 SPATA7Q9P0W8 599 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 TTC7AQ9ULT0 858 aaPredicted RBP11.37□□□□□ -0.59
AGRN-207ENST00000478677 CLDN16Q9Y5I7 305 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 FAM169AQ9Y6X4 670 aa11.37□□□□□ -0.59
AGRN-207ENST00000478677 FAM221AA4D161 298 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 NME2P1O60361 137 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 WFS1O76024 890 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 HEXBP07686 556 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 SP1P08047 785 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 NME2P22392 152 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 MAGEA1P43355 309 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 ART1P52961 327 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 CRADDP78560 199 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 PRDX1Q06830 199 aaKnown RBP11.36□□□□□ -0.59
AGRN-207ENST00000478677 FAM53BQ14153 422 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 KRTCAP3Q53RY4 240 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 GARNL3Q5VVW2 1013 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 ICE2Q659A1 982 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 TMEM214Q6NUQ4 689 aaKnown RBP11.36□□□□□ -0.59
AGRN-207ENST00000478677 ZNF449Q6P9G9 518 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 CYHR1Q6ZMK1 362 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 NFAM1Q8NET5 270 aaPredicted RBP11.36□□□□□ -0.59
AGRN-207ENST00000478677 AICDAQ9GZX7 198 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 DRC3Q9H069 523 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 MMP25Q9NPA2 562 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 TAC3Q9UHF0 121 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 ZNF223Q9UK11 482 aaPredicted RBP11.36□□□□□ -0.59
AGRN-207ENST00000478677 PCDHA13Q9Y5I0 950 aa11.36□□□□□ -0.59
AGRN-207ENST00000478677 A0A1B0GTL3 188 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 FEZF1A0PJY2 475 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 MACROD2A1Z1Q3 448 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 PINLYPA6NC86 204 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 A8MUI8 341 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 C4orf51C9J302 202 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 FAM227AF5H4B4 570 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 NSA2O95478 260 aaKnown RBP11.35□□□□□ -0.59
AGRN-207ENST00000478677 SLC16A8O95907 504 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 APOA4P06727 396 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 NMBRP28336 390 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 TPP2P29144 1249 aaPredicted RBP11.35□□□□□ -0.59
AGRN-207ENST00000478677 SMSP52788 366 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 TIAL1Q01085 375 aaKnown RBP eCLIP11.35□□□□□ -0.59
AGRN-207ENST00000478677 CDH17Q12864 832 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 TRIM14Q14142 442 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 TYSND1Q2T9J0 566 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 BTBD16Q32M84 506 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 TGIF2LYQ8IUE0 185 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 LIX1LQ8IVB5 337 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 AFAP1L2Q8N4X5 818 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 OR5T3Q8NGG3 340 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 OR9A1PQ8NGU1 263 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 FAM136AQ96C01 138 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 SDCCAG3Q96C92 435 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 RAB11FIP5Q9BXF6 653 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 DEPPQ9NTK1 212 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 PCYOX1Q9UHG3 505 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 TSR3Q9UJK0 312 aaKnown RBP11.35□□□□□ -0.59
AGRN-207ENST00000478677 SLC39A10Q9ULF5 831 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 PACSIN2Q9UNF0 486 aaPredicted RBP11.35□□□□□ -0.59
AGRN-207ENST00000478677 RNF6Q9Y252 685 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 PHF3Q92576 2039 aaKnown RBP11.35□□□□□ -0.59
AGRN-207ENST00000478677 SCN3AQ9NY46 2000 aa11.35□□□□□ -0.59
AGRN-207ENST00000478677 ZNF407Q9C0G0 2248 aa11.34□□□□□ -0.59
AGRN-207ENST00000478677 TMEM200CA6NKL6 621 aa11.34□□□□□ -0.59
AGRN-207ENST00000478677 GABRR3A8MPY1 467 aa11.34□□□□□ -0.59
AGRN-207ENST00000478677 LCMT2O60294 686 aaKnown RBP11.34□□□□□ -0.59
AGRN-207ENST00000478677 B3GALT4O96024 378 aa11.34□□□□□ -0.59
AGRN-207ENST00000478677 EZRP15311 586 aaKnown RBP11.34□□□□□ -0.59
AGRN-207ENST00000478677 IL1RNP18510 177 aa11.34□□□□□ -0.59
AGRN-207ENST00000478677 CXCR2P25025 360 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms