RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 KRT74Q7RTS7 529 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 PIK3R3Q92569 461 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 SPSB1Q96BD6 273 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 AGAP4Q96P64 663 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 CDCA3Q99618 268 aaPredicted RBP5.34□□□□□ -1.55
SMC5-203ENST00000475540 BAG1Q99933 345 aaPredicted RBP5.34□□□□□ -1.55
SMC5-203ENST00000475540 HOXD1Q9GZZ0 328 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 MUTYHQ9UIF7 546 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 PRDM4Q9UKN5 801 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 SELENOKQ9Y6D0 94 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 TDRD15B5MCY1 1934 aaKnown RBP5.34□□□□□ -1.55
SMC5-203ENST00000475540 PCNX3Q9H6A9 2034 aa5.33□□□□□ -1.56
SMC5-203ENST00000475540 BICDL2A1A5D9 508 aa5.33□□□□□ -1.56
SMC5-203ENST00000475540 C2CD4DB7Z1M9 353 aa5.33□□□□□ -1.56
SMC5-203ENST00000475540 DIAPH2O60879 1101 aa5.33□□□□□ -1.56
SMC5-203ENST00000475540 DNTTP04053 509 aa5.33□□□□□ -1.56
SMC5-203ENST00000475540 GATA1P15976 413 aaPredicted RBP5.33□□□□□ -1.56
SMC5-203ENST00000475540 CLDN15P56746 228 aa5.33□□□□□ -1.56
SMC5-203ENST00000475540 ILF2Q12905 390 aaKnown RBP5.33□□□□□ -1.56
SMC5-203ENST00000475540 CDC37Q16543 378 aaPredicted RBP5.33□□□□□ -1.56
SMC5-203ENST00000475540 KRTAP5-1Q6L8H4 278 aa5.33□□□□□ -1.56
SMC5-203ENST00000475540 FRRS1Q6ZNA5 592 aa5.33□□□□□ -1.56
SMC5-203ENST00000475540 SPEM1Q8N4L4 309 aa5.33□□□□□ -1.56
SMC5-203ENST00000475540 Q8NBF4 154 aa5.33□□□□□ -1.56
SMC5-203ENST00000475540 TSACCQ96A04 125 aaPredicted RBP5.33□□□□□ -1.56
SMC5-203ENST00000475540 ZNF558Q96NG5 402 aa5.33□□□□□ -1.56
SMC5-203ENST00000475540 DCTN5Q9BTE1 182 aa5.33□□□□□ -1.56
SMC5-203ENST00000475540 PANK3Q9H999 370 aa5.33□□□□□ -1.56
SMC5-203ENST00000475540 XAB2Q9HCS7 855 aaKnown RBP5.33□□□□□ -1.56
SMC5-203ENST00000475540 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.33□□□□□ -1.56
SMC5-203ENST00000475540 NDE1Q9NXR1 346 aa5.33□□□□□ -1.56
SMC5-203ENST00000475540 KLK13Q9UKR3 277 aa5.33□□□□□ -1.56
SMC5-203ENST00000475540 LOC105371242A0A075B767 164 aa5.32□□□□□ -1.56
SMC5-203ENST00000475540 GGPS1O95749 300 aa5.32□□□□□ -1.56
SMC5-203ENST00000475540 FYNP06241 537 aa5.32□□□□□ -1.56
SMC5-203ENST00000475540 HSP90AB1P08238 724 aaKnown RBP5.32□□□□□ -1.56
SMC5-203ENST00000475540 ERCC2P18074 760 aa5.32□□□□□ -1.56
SMC5-203ENST00000475540 OR3A2P47893 321 aa5.32□□□□□ -1.56
SMC5-203ENST00000475540 IL17RELQ6ZVW7 336 aa5.32□□□□□ -1.56
SMC5-203ENST00000475540 PI4KAP1Q8N8J0 262 aa5.32□□□□□ -1.56
SMC5-203ENST00000475540 C9orf43Q8TAL5 461 aaPredicted RBP5.32□□□□□ -1.56
SMC5-203ENST00000475540 ATP6V1E2Q96A05 226 aa5.32□□□□□ -1.56
SMC5-203ENST00000475540 PGM2Q96G03 612 aa5.32□□□□□ -1.56
SMC5-203ENST00000475540 PRICKLE1Q96MT3 831 aaPredicted RBP5.32□□□□□ -1.56
SMC5-203ENST00000475540 TDRD1Q9BXT4 1180 aaKnown RBP5.32□□□□□ -1.56
SMC5-203ENST00000475540 SDCBP2Q9H190 292 aa5.32□□□□□ -1.56
SMC5-203ENST00000475540 ACTL8Q9H568 366 aa5.32□□□□□ -1.56
SMC5-203ENST00000475540 GIMAP2Q9UG22 337 aa5.32□□□□□ -1.56
SMC5-203ENST00000475540 ELF5Q9UKW6 265 aaPredicted RBP5.32□□□□□ -1.56
SMC5-203ENST00000475540 TRBV4-1A0A0J9YWV2 114 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 TSPY2A6NKD2 308 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 CEACAM4O75871 244 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 TSPY3P0CV98 308 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 TSPY8P0CW00 308 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 GLULP15104 373 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 ACADSP16219 412 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 CALRP27797 417 aaKnown RBP5.31□□□□□ -1.56
SMC5-203ENST00000475540 RBMS1P29558 406 aaKnown RBP5.31□□□□□ -1.56
SMC5-203ENST00000475540 EEF1DP29692 281 aaKnown RBP5.31□□□□□ -1.56
SMC5-203ENST00000475540 ALDH1B1P30837 517 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 UBASH3AP57075 661 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 DLK1P80370 383 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 TSPY1Q01534 308 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 KYNUQ16719 465 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 SLC30A6Q6NXT4 461 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 ZNF343Q6P1L6 599 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 ZER1Q7Z7L7 766 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 P2RY8Q86VZ1 359 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 CATSPERDQ86XM0 798 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 RCOR2Q8IZ40 523 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 GPC2Q8N158 579 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 METTL4Q8N3J2 472 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 ANKRD13CQ8N6S4 541 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 CCDC191Q8NCU4 936 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 RMDN1Q96DB5 314 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 RADILQ96JH8 1075 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 RABEP2Q9H5N1 569 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 MTHFD2LQ9H903 347 aaPredicted RBP5.31□□□□□ -1.56
SMC5-203ENST00000475540 RPS10P5Q9NQ39 176 aa5.31□□□□□ -1.56
SMC5-203ENST00000475540 MYH14Q7Z406 1995 aaKnown RBP5.31□□□□□ -1.56
SMC5-203ENST00000475540 URADA6NGE7 173 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 ASB14A6NK59 587 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 PI15O43692 258 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 APOA4P06727 396 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 TLX1P31314 330 aaPredicted RBP5.3□□□□□ -1.56
SMC5-203ENST00000475540 KRT83P78385 493 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 RASA2Q15283 850 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 TCP11X2Q5H9J9 407 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 SLC24A5Q71RS6 500 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 CREBRFQ8IUR6 639 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 OR6J1Q8NGC5 347 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 ATP8B4Q8TF62 1192 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 EXT2Q93063 718 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 C2orf48Q96LS8 159 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 BTBD9Q96Q07 612 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 TXLNGYQ9BZA5 131 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 WIPI2Q9Y4P8 454 aa5.3□□□□□ -1.56
SMC5-203ENST00000475540 IL16Q14005 1332 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 IGHV3OR16-10A0A075B7F0 116 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 A0A1B0GVY2 172 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms