RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 HNRNPFP52597 415 aaKnown RBP6.36□□□□□ -1.39
ATG4A-207ENST00000474825 ARFIP1P53367 373 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 DIO3P55073 304 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 CSNK1G2P78368 415 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 BNC1Q01954 994 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 CUL3Q13618 768 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 KIR2DS3Q14952 304 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 MAPRE2Q15555 327 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 PLK5Q496M5 336 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 ICE2Q659A1 982 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 NXNQ6DKJ4 435 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 C8orf82Q6P1X6 216 aaPredicted RBP6.36□□□□□ -1.39
ATG4A-207ENST00000474825 SLC30A9Q6PML9 568 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 TSSK4Q6SA08 328 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 SCIMPQ6UWF3 145 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 SUSD1Q6UWL2 747 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 HACD2Q6Y1H2 254 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 KANSL1Q7Z3B3 1105 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 RD3Q7Z3Z2 195 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 VN1R5Q7Z5H4 357 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 TMPRSS11BQ86T26 416 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 C17orf64Q86WR6 236 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 RIMKLAQ8IXN7 391 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 TMEFF1Q8IYR6 380 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 FAM9CQ8IZT9 166 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 MIER2Q8N344 545 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 DEFB119Q8N690 84 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 ZBTB44Q8NCP5 570 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 GPR156Q8NFN8 814 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 HUS1BQ8NHY5 278 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.36□□□□□ -1.39
ATG4A-207ENST00000474825 PROKR1Q8TCW9 393 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 SLC37A2Q8TED4 501 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 CHTF18Q8WVB6 975 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 SELENOMQ8WWX9 145 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 SNX19Q92543 992 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 SLC22A18Q96BI1 424 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 PPP1R36Q96LQ0 422 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 TMEM74Q96NL1 305 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 NRTNQ99748 197 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 BTBD10Q9BSF8 475 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 SPNS1Q9H2V7 528 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 MMADHCQ9H3L0 296 aaPredicted RBP6.36□□□□□ -1.39
ATG4A-207ENST00000474825 ELOVL6Q9H5J4 265 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 CAAP1Q9H8G2 361 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 LRTM1Q9HBL6 345 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 ENAMQ9NRM1 1142 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 TMEM184CQ9NVA4 438 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 NOP53Q9NZM5 478 aaKnown RBP6.36□□□□□ -1.39
ATG4A-207ENST00000474825 ANKMY1Q9P2S6 941 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 CPNE7Q9UBL6 633 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 SPASTQ9UBP0 616 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 VPS29Q9UBQ0 182 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 GIMAP2Q9UG22 337 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 APOBEC3BQ9UH17 382 aaKnown RBP6.36□□□□□ -1.39
ATG4A-207ENST00000474825 CIDEBQ9UHD4 219 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 PILRBQ9UKJ0 227 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 ENTPD2Q9Y5L3 495 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 ZFC3H1O60293 1989 aaKnown RBP6.36□□□□□ -1.39
ATG4A-207ENST00000474825 TRBC2A0A5B9 178 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 OR2A25A4D2G3 310 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 LILRA5A6NI73 299 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 BBIP1A8MTZ0 92 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 MAGEB17A8MXT2 336 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 BTN3A3O00478 584 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 SCAMP1O15126 338 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 GSC2O15499 205 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 AQP9O43315 295 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 NOBOXO60393 691 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 PRMT3O60678 531 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 PIAS2O75928 621 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 SEMA3DO95025 777 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 CCNDBP1O95273 360 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 ETHE1O95571 254 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 VIPP01282 170 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 SNRPB2P08579 225 aaKnown RBP6.35□□□□□ -1.39
ATG4A-207ENST00000474825 CHRM5P08912 532 aaPredicted RBP6.35□□□□□ -1.39
ATG4A-207ENST00000474825 PRPS2P11908 318 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 BCKDHAP12694 445 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 CDH1P12830 882 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 CTSEP14091 401 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 AMD1P17707 334 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 PTX3P26022 381 aaPredicted RBP6.35□□□□□ -1.39
ATG4A-207ENST00000474825 AHRP35869 848 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 DPP6P42658 865 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 CCR8P51685 355 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 NEK2P51955 445 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 CLDN8P56748 225 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 STX1BP61266 288 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 YBX1P67809 324 aaKnown RBP6.35□□□□□ -1.39
ATG4A-207ENST00000474825 FOXK2Q01167 660 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 HMGCS1Q01581 520 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 STX5Q13190 355 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 CYLC2Q14093 348 aaPredicted RBP6.35□□□□□ -1.39
ATG4A-207ENST00000474825 RCAN2Q14206 197 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 GPR18Q14330 331 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 SLBPQ14493 270 aaKnown RBP eCLIP6.35□□□□□ -1.39
ATG4A-207ENST00000474825 KRT33BQ14525 404 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 NR1D2Q14995 579 aa6.35□□□□□ -1.39
ATG4A-207ENST00000474825 NR6A1Q15406 480 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms