RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 RAD51AP1Q96B01 352 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 BIRC7Q96CA5 298 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 TBATAQ96M53 351 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CCDC115Q96NT0 180 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 PPP1R2P1Q96PQ5 205 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 TRNT1Q96Q11 434 aaKnown RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 SLC9A7Q96T83 725 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CGRRF1Q99675 332 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 RBBP8Q99708 897 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CDC6Q99741 560 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CDADC1Q9BWV3 514 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 C1QTNF1Q9BXJ1 281 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ACE2Q9BYF1 805 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 POLR1EQ9GZS1 481 aaKnown RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 WNT10AQ9GZT5 417 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 RNF32Q9H0A6 362 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 GABARAPL1Q9H0R8 117 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ABCG4Q9H172 646 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 C2orf40Q9H1Z8 148 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 TOR3AQ9H497 397 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 RNPEPQ9H4A4 650 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 GORASP2Q9H8Y8 452 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 VAT1LQ9HCJ6 419 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 IL1RAPQ9NPH3 570 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 SEMA3GQ9NS98 782 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ABCC13Q9NSE7 274 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 UFSP2Q9NUQ7 469 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 DNAJC11Q9NVH1 559 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 RBFOX1Q9NWB1 397 aaKnown RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 DPP3Q9NY33 737 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 RDH8Q9NYR8 311 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 HSPBP1Q9NZL4 362 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 SLAMF8Q9P0V8 285 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 COL20A1Q9P218 1284 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 COPZ2Q9P299 210 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ASH2LQ9UBL3 628 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 MALT1Q9UDY8 824 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 LEF1Q9UJU2 399 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 TBC1D24Q9ULP9 559 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 SPATA2Q9UM82 520 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 PLCL2Q9UPR0 1127 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 RNF6Q9Y252 685 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 MRPS7Q9Y2R9 242 aaKnown RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ACOT9Q9Y305 439 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 BAZ2BQ9UIF8 2168 aaKnown RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CACNA1SQ13698 1873 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 A0A096LPK6 155 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 TRBV23-1A0A0A0MS06 115 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 A0A1W2PP18 115 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 A8MXK9 166 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 CXorf49A8MYA2 514 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 B4DXG7 233 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 FZD9O00144 591 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 CDC7O00311 574 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 GNGT2O14610 69 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 FPGTO14772 594 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 PPM1DO15297 605 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 AKAP8O43823 692 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 MPZL2O60487 215 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 DPM1O60762 260 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 ERN1O75460 977 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 RAD17O75943 681 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 RECQL5O94762 991 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 IPO13O94829 963 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 SCELO95171 688 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 HTR3BO95264 441 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 STARD3NLO95772 234 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 C2P06681 752 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 FABP1P07148 127 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 ANXA6P08133 673 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 HTR1AP08908 422 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 ANXA3P12429 323 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 LCP1P13796 627 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 DARSP14868 501 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 VEGFAP15692 232 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 SPNP16150 400 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 HOXB8P17481 243 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 KCNA5P22460 613 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 ATP5F1P24539 256 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 HOXA6P31267 233 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 SHMT2P34897 504 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 EPHX2P34913 555 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 SREBF1P36956 1147 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 ATP5OP48047 213 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 PGDP52209 483 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 CLDN20P56880 219 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 RPS6P62753 249 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 EEF1A1P68104 462 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 EEF1A2Q05639 463 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 PUDPQ08623 228 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 FGL1Q08830 312 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 SLC10A2Q12908 348 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 BTN1A1Q13410 526 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 BMPR2Q13873 1038 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF460Q14592 562 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 PUM1Q14671 1186 aaKnown RBP eCLIP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 SLC9A5Q14940 896 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 EMC2Q15006 297 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 SF3A2Q15428 464 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 TAF12Q16514 161 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms