RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 PIK3CGP48736 1102 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 CLK1P49759 484 aaKnown RBP6.61□□□□□ -1.35
SCAF4-204ENST00000467731 NAA20P61599 178 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 SH3BP2P78314 561 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 DAB2P98082 770 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 OCRLQ01968 901 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 KLC1Q07866 573 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 PRKAA1Q13131 559 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 NR1D2Q14995 579 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 SF1Q15637 639 aaKnown RBP6.61□□□□□ -1.35
SCAF4-204ENST00000467731 INAVAQ3KP66 663 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 C4orf46Q504U0 113 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 PERM1Q5SV97 790 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 NKAIN2Q5VXU1 208 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 RGS9BPQ6ZS82 235 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 TMPRSS11BQ86T26 416 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 Q8N9G6 341 aaPredicted RBP6.61□□□□□ -1.35
SCAF4-204ENST00000467731 OR6C4Q8NGE1 309 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 AGR3Q8TD06 166 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 TRMOQ9BU70 441 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 TWSG1Q9GZX9 223 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 TNFRSF12AQ9NP84 129 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 MID1IP1Q9NPA3 183 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 PCDHB11Q9Y5F2 797 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 IGHV1OR21-1A0A087WYE8 117 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 PRAMEF4O60810 478 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 B3GALNT1O75752 331 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 MLYCDO95822 493 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 PROS1P07225 676 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 PNLIPP16233 465 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 S100A1P23297 94 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 LSP1P33241 339 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 S100A5P33763 92 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 EPHA4P54764 986 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 PRDX1Q06830 199 aaKnown RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 GALNT1Q10472 559 aaPredicted RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 TRAF3Q13114 568 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 KIR2DS3Q14952 304 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 BCL2A1Q16548 175 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 AMZ1Q400G9 498 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 CATSPEREQ5SY80 951 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 PRAMEF9Q5VWM5 478 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 LETMD1Q6P1Q0 360 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 SLC2A7Q6PXP3 512 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 SPRED1Q7Z699 444 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 CUZD1Q86UP6 607 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 C17orf64Q86WR6 236 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 NAXDQ8IW45 347 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 ZNF781Q8N8C0 355 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 OR2L3Q8NG85 312 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 FLVCR1-AS1Q8TAF5 88 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 SUN5Q8TC36 379 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 AGAP11Q8TF27 550 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 WDR60Q8WVS4 1066 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 SLC5A11Q8WWX8 675 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 SLC22A18Q96BI1 424 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 PRR11Q96HE9 360 aaPredicted RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 AHCYL2Q96HN2 611 aaKnown RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 CNDP2Q96KP4 475 aaKnown RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 PPM1MQ96MI6 270 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 OR2A14Q96R47 310 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 HAUS8Q9BT25 410 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 NTMT1Q9BV86 223 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 PCBD2Q9H0N5 130 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 CUEDC1Q9NWM3 386 aaPredicted RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 ACTR10Q9NZ32 417 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 ZDHHC2Q9UIJ5 367 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 DYRK1BQ9Y463 629 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 KNTC1P50748 2209 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 IGKV1-8A0A0C4DH67 115 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 C2orf74A8MZ97 194 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 GIPC1O14908 333 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 B4GAT1O43505 415 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 OR4F21O95013 312 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 OTCP00480 354 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 CDH1P12830 882 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 UGT2B7P16662 529 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 MPSTP25325 297 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 FOXA1P55317 472 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 ERVPABLB-1P60509 514 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 GPLD1P80108 840 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 CHIT1Q13231 466 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 XKR6Q5GH73 641 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 KIAA1614Q5VZ46 1190 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 IRGCQ6NXR0 463 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 KLHL35Q6PF15 583 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 SPESP1Q6UW49 350 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 CCBE1Q6UXH8 406 aaPredicted RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 EFL1Q7Z2Z2 1120 aaKnown RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 SYVN1Q86TM6 617 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 OR4F6Q8NGB9 312 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 IFI44Q8TCB0 444 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 NCSTNQ92542 709 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 NAT6Q93015 286 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 KCNA7Q96RP8 456 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 ZNF382Q96SR6 550 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 CCDC3Q9BQI4 270 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 ACTR8Q9H981 624 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 EML4Q9HC35 981 aaKnown RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 MRPS30Q9NP92 439 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms