RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 B3GNT6Q6ZMB0 384 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 CHID1Q9BWS9 393 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 RNF121Q9H920 327 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 PDLIM7Q9NR12 457 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 TMEM233B4DJY2 109 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 FHP07954 510 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 DNAJB1P25685 340 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 SCAPQ12770 1279 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 ACSBG2Q5FVE4 666 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 ZDHHC14Q8IZN3 488 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 PEX13Q92968 403 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 TOP1MTQ969P6 601 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 FIZ1Q96SL8 496 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 LINC00597Q9H2U6 94 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 LMAN1LQ9HAT1 526 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 TVP23BQ9NYZ1 205 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 AK5Q9Y6K8 562 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 ZNF860A6NHJ4 632 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 PLK4O00444 970 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 ITM2AO43736 263 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 MAFKO60675 156 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 BCHEP06276 602 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 CHRM1P11229 460 aaPredicted RBP17.3■□□□□ 0.36
ATG9A-215ENST00000446716 PPP3R1P63098 170 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 ZNF267Q14586 743 aaPredicted RBP17.3■□□□□ 0.36
ATG9A-215ENST00000446716 TMEM214Q6NUQ4 689 aaKnown RBP17.3■□□□□ 0.36
ATG9A-215ENST00000446716 EPYCQ99645 322 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 HAPLN2Q9GZV7 340 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 MVB12BQ9H7P6 319 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 TRIM39Q9HCM9 518 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.3■□□□□ 0.36
ATG9A-215ENST00000446716 SESN1Q9Y6P5 492 aa17.3■□□□□ 0.36
ATG9A-215ENST00000446716 RBMXL2O75526 392 aaKnown RBP17.29■□□□□ 0.36
ATG9A-215ENST00000446716 PFKLP17858 780 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 WDR4P57081 412 aaKnown RBP17.29■□□□□ 0.36
ATG9A-215ENST00000446716 ID2Q02363 134 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 C1orf220Q5T0J3 134 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 EMC10Q5UCC4 262 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 AHSA2Q719I0 299 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 OR10H4Q8NGA5 316 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 PHOSPHO1Q8TCT1 267 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 SLC17A9Q9BYT1 436 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 DLGAP4Q9Y2H0 992 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 BAZ2AQ9UIF9 1905 aaKnown RBP17.29■□□□□ 0.36
ATG9A-215ENST00000446716 TRAP1Q12931 704 aaKnown RBP17.29■□□□□ 0.36
ATG9A-215ENST00000446716 KIAA1161Q6NSJ0 714 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 USP53Q70EK8 1073 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 CGREF1Q99674 301 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 HCFC1R1Q9NWW0 138 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 MUSKO15146 869 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 RAP2AP10114 183 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 GLDCP23378 1020 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 PSMA1P25786 263 aaKnown RBP17.29■□□□□ 0.36
ATG9A-215ENST00000446716 TLR1Q15399 786 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 ZSCAN1Q8NBB4 408 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 TSACCQ96A04 125 aaPredicted RBP17.29■□□□□ 0.36
ATG9A-215ENST00000446716 COX4I2Q96KJ9 171 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 POPDC3Q9HBV1 291 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 LYARQ9NX58 379 aaKnown RBP17.29■□□□□ 0.36
ATG9A-215ENST00000446716 COMMD9Q9P000 198 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 ATXN10Q9UBB4 475 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 ASGR2P07307 311 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 DRD1P21728 446 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 ACRV1P26436 265 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 FOXN2P32314 431 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 PER3P56645 1201 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 PPP2R2BQ00005 443 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 DUOXA1Q1HG43 343 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 RBCK1Q9BYM8 510 aa17.29■□□□□ 0.36
ATG9A-215ENST00000446716 CD2P06729 351 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 HRH2P25021 359 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 CCT3P49368 545 aaKnown RBP17.28■□□□□ 0.36
ATG9A-215ENST00000446716 ITGADQ13349 1161 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 LRTOMTQ8WZ04 291 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 HHIPL1Q96JK4 782 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 PTCHD1Q96NR3 888 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 CASD1Q96PB1 797 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 COMMD4Q9H0A8 199 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 PTGES2Q9H7Z7 377 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 OPN1SWP03999 348 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 CRB2Q5IJ48 1285 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 CEACAM20Q6UY09 585 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 CRYGNQ8WXF5 182 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 MCOLN1Q9GZU1 580 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.28■□□□□ 0.36
ATG9A-215ENST00000446716 ACTL8Q9H568 366 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 PRTFDC1Q9NRG1 225 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 FTSJ1Q9UET6 329 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 HCN2Q9UL51 889 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 IFNA6P05013 189 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 THEGLP0DJG4 465 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 LPAL2Q16609 132 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 ADGRD2Q7Z7M1 963 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 NAT14Q8WUY8 206 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 PDCD10Q9BUL8 212 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 SPIN1Q9Y657 262 aaPredicted RBP17.28■□□□□ 0.36
ATG9A-215ENST00000446716 KLHL33A6NCF5 533 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 CLEC3AO75596 197 aa17.28■□□□□ 0.36
ATG9A-215ENST00000446716 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.28■□□□□ 0.362e-7■■■■■ 63.8
ATG9A-215ENST00000446716 GHDCQ8N2G8 530 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms