RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 CDH1P12830 882 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 GRK3P35626 688 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 HNMTP50135 292 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 RAB10P61026 200 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 NKG7Q16617 165 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 HKDC1Q2TB90 917 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 LACTB2Q53H82 288 aaPredicted RBP17.75■□□□□ 0.43
CCDC188-202ENST00000444532 PLD3Q8IV08 490 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 CEP112Q8N8E3 955 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 ABHD11Q8NFV4 315 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 COL26A1Q96A83 441 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 TRIM55Q9BYV6 548 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 SH2B3Q9UQQ2 575 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 MAU2Q9Y6X3 613 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 TLN1Q9Y490 2541 aaKnown RBP17.74■□□□□ 0.43
CCDC188-202ENST00000444532 VSTM2BA6NLU5 285 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 PEX12O00623 359 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 UMODP07911 640 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 PHBP35232 272 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 CCR8P51685 355 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 ATP6V0D1P61421 351 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 ATP1A4Q13733 1029 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 FAM53BQ14153 422 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 TSNQ15631 228 aaKnown RBP17.74■□□□□ 0.43
CCDC188-202ENST00000444532 ZKSCAN8Q15776 578 aaPredicted RBP17.74■□□□□ 0.43
CCDC188-202ENST00000444532 NDUFA9Q16795 377 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 CPZQ66K79 652 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 FRA10AC1Q70Z53 315 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 MRGPREQ86SM8 312 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 ARHGEF39Q8N4T4 335 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 METTL27Q8N6F8 245 aaPredicted RBP17.74■□□□□ 0.43
CCDC188-202ENST00000444532 OR4K1Q8NGD4 311 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 IFT81Q8WYA0 676 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 OR4K3Q96R72 315 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 EGFL8Q99944 293 aa17.74■□□□□ 0.43
CCDC188-202ENST00000444532 ZNF71Q9NQZ8 489 aaPredicted RBP17.74■□□□□ 0.43
CCDC188-202ENST00000444532 ZNF282Q9UDV7 671 aaPredicted RBP17.74■□□□□ 0.43
CCDC188-202ENST00000444532 PHGDHO43175 533 aaKnown RBP17.73■□□□□ 0.43
CCDC188-202ENST00000444532 FAM155BO75949 473 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 DNAJB5O75953 348 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 CCL11P51671 97 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 OCA2Q04671 838 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 THOC6Q86W42 341 aaKnown RBP17.73■□□□□ 0.43
CCDC188-202ENST00000444532 DTWD1Q8N5C7 304 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 TBC1D19Q8N5T2 526 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 CAMKVQ8NCB2 501 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 TM4SF19Q96DZ7 209 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 UBXN10Q96LJ8 280 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 FER1L6-AS2Q96M78 137 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 CYTH2Q99418 400 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 SPSB2Q99619 263 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 SARGQ9BW04 601 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 DRC3Q9H069 523 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 CTSFQ9UBX1 484 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 TP53TG5Q9Y2B4 290 aa17.73■□□□□ 0.43
CCDC188-202ENST00000444532 PCDHGA9Q9Y5G4 932 aaKnown RBP17.73■□□□□ 0.43
CCDC188-202ENST00000444532 IGLV3-12A0A075B6K2 115 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 FEZF1A0PJY2 475 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 P2RX6O15547 441 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 SUV39H1O43463 412 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 LCMT2O60294 686 aaKnown RBP17.72■□□□□ 0.43
CCDC188-202ENST00000444532 CEACAM4O75871 244 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 FBLP22087 321 aaKnown RBP17.72■□□□□ 0.43
CCDC188-202ENST00000444532 MMP11P24347 488 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 CRABP2P29373 138 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 SLC26A3P40879 764 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 CHAF1BQ13112 559 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 DSG2Q14126 1118 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 CSHL1Q14406 222 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 TGFBIQ15582 683 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 CDKL4Q5MAI5 379 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 VN1R4Q7Z5H5 301 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 PPP1R32Q7Z5V6 425 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 MFSD9Q8NBP5 474 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 STT3BQ8TCJ2 826 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 NEIL2Q969S2 332 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 RHBDF1Q96CC6 855 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 FMO2Q99518 471 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 SLC25A23Q9BV35 468 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 MLXIPLQ9NP71 852 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 SEMA3GQ9NS98 782 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 P4HTMQ9NXG6 502 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 DYRK1BQ9Y463 629 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 KCNE2Q9Y6J6 123 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 MED13Q9UHV7 2174 aa17.72■□□□□ 0.43
CCDC188-202ENST00000444532 PCSK5Q92824 1860 aa17.71■□□□□ 0.43
CCDC188-202ENST00000444532 TRBC2A0A5B9 178 aa17.71■□□□□ 0.43
CCDC188-202ENST00000444532 AGPSO00116 658 aa17.71■□□□□ 0.43
CCDC188-202ENST00000444532 FOXS1O43638 330 aa17.71■□□□□ 0.43
CCDC188-202ENST00000444532 ZGLP1P0C6A0 271 aa17.71■□□□□ 0.43
CCDC188-202ENST00000444532 PLA2G2AP14555 144 aa17.71■□□□□ 0.43
CCDC188-202ENST00000444532 CD1DP15813 335 aa17.71■□□□□ 0.43
CCDC188-202ENST00000444532 BCL6P41182 706 aa17.71■□□□□ 0.43
CCDC188-202ENST00000444532 FOXL2P58012 376 aa17.71■□□□□ 0.43
CCDC188-202ENST00000444532 EFTUD2Q15029 972 aaKnown RBP eCLIP17.71■□□□□ 0.43
CCDC188-202ENST00000444532 ASB18Q6ZVZ8 466 aa17.71■□□□□ 0.43
CCDC188-202ENST00000444532 RAPH1Q70E73 1250 aa17.71■□□□□ 0.43
CCDC188-202ENST00000444532 CCDC91Q7Z6B0 441 aa17.71■□□□□ 0.43
CCDC188-202ENST00000444532 PTRH1Q86Y79 214 aaKnown RBP17.71■□□□□ 0.43
CCDC188-202ENST00000444532 GPSM1Q86YR5 675 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms