RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SLC28A1O00337 649 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 YES1P07947 543 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 IFNA8P32881 189 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 MADCAM1Q13477 382 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 SMU1Q2TAY7 513 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 C10orf62Q5T681 223 aaPredicted RBP19.65■□□□□ 0.74
SHOX2-203ENST00000441443 OR4F3Q6IEY1 312 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 C11orf74Q86VG3 221 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 TRIM48Q8IWZ4 208 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 TTC9BQ8N6N2 239 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 COL21A1Q96P44 957 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 PPT2Q9UMR5 302 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 SLC6A14Q9UN76 642 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 MICAL3Q7RTP6 2002 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 H3BM21 787 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 C9P02748 559 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 SLC10A3P09131 477 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 ITGA2P17301 1181 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 TGM4P49221 684 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 CLCN7P51798 805 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 DOC2BQ14184 412 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 CPSF6Q16630 551 aaKnown RBP eCLIP19.65■□□□□ 0.74
SHOX2-203ENST00000441443 ATAD1Q8NBU5 361 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 ST13P5Q8NFI4 369 aaPredicted RBP19.65■□□□□ 0.74
SHOX2-203ENST00000441443 KCNJ9Q92806 393 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 FATE1Q969F0 183 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 TRIM63Q969Q1 353 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 TOR4AQ9NXH8 423 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 FNIP2Q9P278 1114 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 CFL2Q9Y281 166 aa19.65■□□□□ 0.74
SHOX2-203ENST00000441443 A0A0D9SEW6 157 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 LOC105371267A0A1B0GV96 52 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 AOC2O75106 756 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 AQP1P29972 269 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 RRM2P31350 389 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 TTPAP49638 278 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 PAF1Q8N7H5 531 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 LPCAT1Q8NF37 534 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 GRPEL2Q8TAA5 225 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 UBASH3BQ8TF42 649 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 ULK4Q96C45 1275 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 SPATA17Q96L03 361 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 FEVQ99581 238 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 ARPC5LQ9BPX5 153 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 CNPPD1Q9BV87 410 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 SMURF1Q9HCE7 757 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 ABT1Q9ULW3 272 aaKnown RBP19.64■□□□□ 0.73
SHOX2-203ENST00000441443 TLR6Q9Y2C9 796 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 FAM25AB3EWG3 89 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 FAM25CB3EWG5 89 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 FAM25GB3EWG6 89 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 TNFRSF10BO14763 440 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 ADRA2AP08913 450 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 TIE1P35590 1138 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 GGT2P36268 569 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 FBXO43Q4G163 708 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 ERAP2Q6P179 960 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 ZNF605Q86T29 641 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 VANGL1Q8TAA9 524 aaPredicted RBP19.64■□□□□ 0.73
SHOX2-203ENST00000441443 SLC7A6Q92536 515 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 SLC39A13Q96H72 371 aa19.64■□□□□ 0.73
SHOX2-203ENST00000441443 A0A1W2PQ09 198 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 UPK3BL1B0FP48 263 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 UPK3BL2E5RIL1 263 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 UGT2B17O75795 530 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 GLUD1P00367 558 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 ENGP17813 658 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 DMC1Q14565 340 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 PCM1Q15154 2024 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 TAF1AQ15573 450 aaPredicted RBP19.63■□□□□ 0.73
SHOX2-203ENST00000441443 VMACQ2NL98 169 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 LAX1Q8IWV1 398 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 FAM217AQ8IXS0 508 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 PEX5LQ8IYB4 626 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 CFAP52Q8N1V2 620 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 OR52J3Q8NH60 311 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 RLIMQ9NVW2 624 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 WWOXQ9NZC7 414 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 RPS6KA6Q9UK32 745 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 PCDHGB2Q9Y5G2 931 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 MANBAO00462 879 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 NBNO60934 754 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 KCNK5O95279 499 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 ESR1P03372 595 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 CSF2P04141 144 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 SEMG1P04279 462 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 PRKAR2AP13861 404 aaKnown RBP19.63■□□□□ 0.73
SHOX2-203ENST00000441443 ITGA1P56199 1179 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 MGAT3Q09327 533 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 SMARCB1Q12824 385 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 GPAT3Q53EU6 434 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 PRR23CQ6ZRP0 262 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 ADAMTSL2Q86TH1 951 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 PLCXD1Q9NUJ7 323 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 RIMKLBQ9ULI2 386 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 MAN2B2Q9Y2E5 1009 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 ARIH1Q9Y4X5 557 aaPredicted RBP19.63■□□□□ 0.73
SHOX2-203ENST00000441443 PCDHGC4Q9Y5F7 938 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 DOCK4Q8N1I0 1966 aa19.63■□□□□ 0.73
SHOX2-203ENST00000441443 EFCAB10A6NFE3 127 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms