RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SLC14A1Q13336 389 aa8.78□□□□□ -1
COPB1-202ENST00000439561 ZNF57Q68EA5 555 aaPredicted RBP8.78□□□□□ -1
COPB1-202ENST00000439561 SNX20Q7Z614 316 aa8.78□□□□□ -1
COPB1-202ENST00000439561 ELMOD2Q8IZ81 293 aa8.78□□□□□ -1
COPB1-202ENST00000439561 RBFAQ8N0V3 343 aa8.78□□□□□ -1
COPB1-202ENST00000439561 C7orf57Q8NEG2 295 aa8.78□□□□□ -1
COPB1-202ENST00000439561 GPR151Q8TDV0 419 aa8.78□□□□□ -1
COPB1-202ENST00000439561 GGHQ92820 318 aa8.78□□□□□ -1
COPB1-202ENST00000439561 MYEOVQ96EZ4 313 aa8.78□□□□□ -1
COPB1-202ENST00000439561 APIPQ96GX9 242 aa8.78□□□□□ -1
COPB1-202ENST00000439561 OR5M11Q96RB7 305 aa8.78□□□□□ -1
COPB1-202ENST00000439561 CPPED1Q9BRF8 314 aaPredicted RBP8.78□□□□□ -1
COPB1-202ENST00000439561 CDADC1Q9BWV3 514 aa8.78□□□□□ -1
COPB1-202ENST00000439561 ACPTQ9BZG2 426 aa8.78□□□□□ -1
COPB1-202ENST00000439561 CD244Q9BZW8 370 aa8.78□□□□□ -1
COPB1-202ENST00000439561 CRISPLD1Q9H336 500 aa8.78□□□□□ -1
COPB1-202ENST00000439561 ABCB8Q9NUT2 735 aa8.78□□□□□ -1
COPB1-202ENST00000439561 STMN3Q9NZ72 180 aa8.78□□□□□ -1
COPB1-202ENST00000439561 KIAA1522Q9P206 1035 aaPredicted RBP8.78□□□□□ -1
COPB1-202ENST00000439561 PADI3Q9ULW8 664 aa8.78□□□□□ -1
COPB1-202ENST00000439561 NEU3Q9UQ49 428 aa8.78□□□□□ -1
COPB1-202ENST00000439561 MED16Q9Y2X0 877 aa8.78□□□□□ -1
COPB1-202ENST00000439561 DHRS7Q9Y394 339 aa8.78□□□□□ -1
COPB1-202ENST00000439561 MAP4K5Q9Y4K4 846 aa8.78□□□□□ -1
COPB1-202ENST00000439561 ANK1P16157 1881 aa8.78□□□□□ -1
COPB1-202ENST00000439561 TRIM64BA6NI03 449 aa8.78□□□□□ -1
COPB1-202ENST00000439561 CLCA1A8K7I4 914 aa8.78□□□□□ -1
COPB1-202ENST00000439561 WNT9AO14904 365 aa8.78□□□□□ -1
COPB1-202ENST00000439561 ANKRD28O15084 1053 aa8.78□□□□□ -1
COPB1-202ENST00000439561 HOXC11O43248 304 aaPredicted RBP8.78□□□□□ -1
COPB1-202ENST00000439561 LZTS3O60299 673 aaPredicted RBP8.78□□□□□ -1
COPB1-202ENST00000439561 PSIP1O75475 530 aaKnown RBP8.78□□□□□ -1
COPB1-202ENST00000439561 YES1P07947 543 aa8.78□□□□□ -1
COPB1-202ENST00000439561 PSKH1P11801 424 aa8.78□□□□□ -1
COPB1-202ENST00000439561 TYMPP19971 482 aa8.78□□□□□ -1
COPB1-202ENST00000439561 PSMA1P25786 263 aaKnown RBP8.78□□□□□ -1
COPB1-202ENST00000439561 CD6P30203 668 aa8.78□□□□□ -1
COPB1-202ENST00000439561 TNFSF8P32971 234 aa8.78□□□□□ -1
COPB1-202ENST00000439561 FEN1P39748 380 aaKnown RBP8.78□□□□□ -1
COPB1-202ENST00000439561 SLC19A1P41440 591 aa8.78□□□□□ -1
COPB1-202ENST00000439561 RGS6P49758 472 aa8.78□□□□□ -1
COPB1-202ENST00000439561 SCN1BQ07699 218 aa8.78□□□□□ -1
COPB1-202ENST00000439561 CCDC58Q4VC31 144 aa8.78□□□□□ -1
COPB1-202ENST00000439561 LRRC73Q5JTD7 316 aa8.78□□□□□ -1
COPB1-202ENST00000439561 TUBA3EQ6PEY2 450 aa8.78□□□□□ -1
COPB1-202ENST00000439561 GALNT7Q86SF2 657 aa8.78□□□□□ -1
COPB1-202ENST00000439561 OR5AK3PQ8NH89 298 aa8.78□□□□□ -1
COPB1-202ENST00000439561 C1GALT1C1Q96EU7 318 aa8.78□□□□□ -1
COPB1-202ENST00000439561 CCM2Q9BSQ5 444 aa8.78□□□□□ -1
COPB1-202ENST00000439561 TPT1P8Q9HAU6 139 aa8.78□□□□□ -1
COPB1-202ENST00000439561 DNAJC27Q9NZQ0 273 aa8.78□□□□□ -1
COPB1-202ENST00000439561 RNF181Q9P0P0 153 aa8.78□□□□□ -1
COPB1-202ENST00000439561 SLC22A14Q9Y267 594 aa8.78□□□□□ -1
COPB1-202ENST00000439561 CLCA3PQ9Y6N3 262 aa8.78□□□□□ -1
COPB1-202ENST00000439561 FABP12A6NFH5 140 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 PLK4O00444 970 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 GFRA2O00451 464 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 ADORA3P0DMS8 318 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 TGM4P49221 684 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 CCL23P55773 120 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 NKX3-2P78367 333 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 DUSP4Q13115 394 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 CHIT1Q13231 466 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 C1DQ13901 141 aaKnown RBP8.77□□□□□ -1.01
COPB1-202ENST00000439561 GBX1Q14549 363 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 CBX2Q14781 532 aaPredicted RBP8.77□□□□□ -1.01
COPB1-202ENST00000439561 HKDC1Q2TB90 917 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 SETMARQ53H47 684 aaPredicted RBP8.77□□□□□ -1.01
COPB1-202ENST00000439561 XKR6Q5GH73 641 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 ZMAT1Q5H9K5 638 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 ZSWIM9Q86XI8 627 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 C1orf74Q96LT6 269 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 POLR2J2Q9GZM3 115 aaKnown RBP8.77□□□□□ -1.01
COPB1-202ENST00000439561 CLMPQ9H6B4 373 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 SMURF1Q9HCE7 757 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 ANKHQ9HCJ1 492 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 GKN1Q9NS71 199 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 SIRT5Q9NXA8 310 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 ELOVL2Q9NXB9 296 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 COMMD3Q9UBI1 195 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 MEIOCA2RUB1 952 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 SYNDIG1LA6NDD5 238 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 NT5C1B-RDH14C9J2C7 533 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 C5orf58C9J3I9 102 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 CDRT1O95170 752 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 TSPAN12O95859 305 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 PRPS2P11908 318 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 HOXC13P31276 330 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 GRK5P34947 590 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 ATP6V1E1P36543 226 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 CDC20Q12834 499 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 SLAMF1Q13291 335 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 CDH18Q13634 790 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 NFE2L1Q14494 772 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 MFSD14CQ5VZR4 134 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 KDM4DQ6B0I6 523 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 CAPN13Q6MZZ7 669 aaPredicted RBP8.77□□□□□ -1.01
COPB1-202ENST00000439561 FAM171BQ6P995 826 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 LACC1Q8IV20 430 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 FAM9CQ8IZT9 166 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms