RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CLDN15P56746 228 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 RCN2Q14257 317 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 CDO1Q16878 200 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 TYSND1Q2T9J0 566 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 KRTAP27-1Q3LI81 207 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 FAM174BQ3ZCQ3 159 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 ZFP69Q49AA0 526 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 ODF2Q5BJF6 829 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 XKR3Q5GH77 459 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 SLC25A53Q5H9E4 307 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 PWWP2BQ6NUJ5 590 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 CASC4Q6P4E1 433 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 CYB5D1Q6P9G0 228 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 C4orf19Q8IY42 314 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 DBF4BQ8NFT6 615 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 OR10Q1Q8NGQ4 319 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 RIT1Q92963 219 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 PYCR2Q96C36 320 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 PRAC1Q96KF2 57 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 SHARPINQ9H0F6 387 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 LMAN1LQ9HAT1 526 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 ABCB8Q9NUT2 735 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 MRPS28Q9Y2Q9 187 aaKnown RBP3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 KIAA1217Q5T5P2 1943 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 OOEPA6NGQ2 149 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 MSGN1A6NI15 193 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 YDJCA8MPS7 323 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 NTN3O00634 580 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 KRT33AO76009 404 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 SERPING1P05155 500 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 DARSP14868 501 aaKnown RBP3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 ATP6V1B1P15313 513 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 ZNF26P17031 533 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 EPORP19235 508 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 GCNT1Q02742 428 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 FOLH1Q04609 750 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 PPP2R5CQ13362 524 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 HNRNPDQ14103 355 aaKnown RBP3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 SMU1Q2TAY7 513 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 ADAMTSL4-AS1Q5T5F5 129 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 UGT3A1Q6NUS8 523 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 AMIGO1Q86WK6 493 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 CROCCP3Q8IVE0 287 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 UNC45BQ8IWX7 931 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 APCDD1Q8J025 514 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 CCDC63Q8NA47 563 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 AFAP1L1Q8TED9 768 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 WBP2Q969T9 261 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 TEKT1Q969V4 418 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 MAGED4Q96JG8 741 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 C4orf45Q96LM5 186 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 HNRNPABQ99729 332 aaKnown RBP3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 MAP3K3Q99759 626 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 FUCA2Q9BTY2 467 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 ATP13A3Q9H7F0 1226 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 TMEM206Q9H813 350 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 TUFT1Q9NNX1 390 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 VPS18Q9P253 973 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 MTRRQ9UBK8 725 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 EPHA6Q9UF33 1036 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 GMEB2Q9UKD1 530 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 CHKBQ9Y259 395 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 WDR37Q9Y2I8 494 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 PYGO1Q9Y3Y4 419 aa3.23□□□□□ -1.89
TRAPPC13-204ENST00000438419 ABCC9O60706 1549 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 TRIM64A6NGJ6 449 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 TRIM64BA6NI03 449 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 SLC33A1O00400 549 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 SLC30A4O14863 429 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 ZNF263O14978 683 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 CTDSPLO15194 276 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 FLRT2O43155 660 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 DDHD2O94830 711 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 GOSR1O95249 250 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 ITIH1P19827 911 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 CCND3P30281 292 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 TIA1P31483 386 aaKnown RBP eCLIP3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 ERVK11-1P61568 191 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 MYL7Q01449 175 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 SP3Q02447 781 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 TRAP1Q12931 704 aaKnown RBP3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 RBBP7Q16576 425 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 SGSM1Q2NKQ1 1148 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 SPOUT1Q5T280 376 aaKnown RBP3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 NOTUMQ6P988 496 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 TMEM207Q6UWW9 146 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 LINC00696Q6ZRV3 163 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 Q6ZSR9 355 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 PIGWQ7Z7B1 504 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 PHLDB2Q86SQ0 1253 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 LACC1Q8IV20 430 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 CARNMT1Q8N4J0 409 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 KLHDC1Q8N7A1 406 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 GPRC5AQ8NFJ5 357 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 OR7G3Q8NG95 312 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 OR10G8Q8NGN5 311 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 PTP4A1Q93096 173 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 TSACCQ96A04 125 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 CENPTQ96BT3 561 aa3.22□□□□□ -1.89
TRAPPC13-204ENST00000438419 PGM2Q96G03 612 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms