RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ELFN1P0C7U0 828 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 MATN1P21941 496 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 IGFBP5P24593 272 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 GTF2IRD2BQ6EKJ0 949 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 OR2T5Q6IEZ7 315 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 LIPIQ6XZB0 460 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 CAMKMTQ7Z624 323 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 GTF2IRD2Q86UP8 949 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 NRSN1Q8IZ57 195 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 CLECL1Q8IZS7 167 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 LILRA3Q8N6C8 439 aaPredicted RBP17.96■□□□□ 0.47
CLK1-205ENST00000434813 OR2T29Q8NH02 315 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 FOXJ1Q92949 421 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 AP2M1Q96CW1 435 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 SPATA9Q9BWV2 254 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 MTG2Q9H4K7 406 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 SGK2Q9HBY8 427 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 MAPRE3Q9UPY8 281 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 ERVK-11Q9UQG0 969 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 NAALAD2Q9Y3Q0 740 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 ALPK3Q96L96 1907 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 PSMD11O00231 422 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 SLC1A7O00341 560 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 BCKDKO14874 412 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 ETHE1O95571 254 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 LAMP1P11279 417 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 KDELR2P33947 212 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 STT3AP46977 705 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 RAE1P78406 368 aaKnown RBP17.95■□□□□ 0.46
CLK1-205ENST00000434813 ERAP2Q6P179 960 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 ZNF621Q6ZSS3 439 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 SNX19Q92543 992 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 SGCDQ92629 289 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 ZNF566Q969W8 418 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 PKP4Q99569 1192 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 DUSP26Q9BV47 211 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 LHPPQ9H008 270 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 PCDHB11Q9Y5F2 797 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 GMEB1Q9Y692 573 aa17.95■□□□□ 0.46
CLK1-205ENST00000434813 XYLBO75191 536 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 RB1P06400 928 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 SRPRAP08240 638 aaKnown RBP17.94■□□□□ 0.46
CLK1-205ENST00000434813 PNLIPRP1P54315 467 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 TMEM115Q12893 351 aaPredicted RBP17.94■□□□□ 0.46
CLK1-205ENST00000434813 VEZF1Q14119 521 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 ZNF658BQ4V348 819 aaPredicted RBP17.94■□□□□ 0.46
CLK1-205ENST00000434813 SPIN4Q56A73 249 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 FGD3Q5JSP0 725 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 CBLL1Q75N03 491 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 PARS2Q7L3T8 475 aaKnown RBP17.94■□□□□ 0.46
CLK1-205ENST00000434813 CROCCP3Q8IVE0 287 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 C1orf52Q8N6N3 182 aaKnown RBP17.94■□□□□ 0.46
CLK1-205ENST00000434813 PIK3C3Q8NEB9 887 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 CDC26Q8NHZ8 85 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 RAB2BQ8WUD1 216 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 EZH1Q92800 747 aaPredicted RBP17.94■□□□□ 0.46
CLK1-205ENST00000434813 SH3KBP1Q96B97 665 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 FOPNLQ96NB1 174 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 PLGRKTQ9HBL7 147 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 BTNL2Q9UIR0 455 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 FBXO10Q9UK96 956 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 NOTCH4Q99466 2003 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 YY2O15391 372 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 CPSF4O95639 269 aaKnown RBP17.94■□□□□ 0.46
CLK1-205ENST00000434813 FABP3P05413 133 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 CCDC159P0C7I6 412 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 IRS1P35568 1242 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 GTF2H3Q13889 308 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 ACOX1Q15067 660 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 ADNP2Q6IQ32 1131 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 CEP68Q76N32 757 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 EIF3MQ7L2H7 374 aaKnown RBP17.94■□□□□ 0.46
CLK1-205ENST00000434813 SYNPOQ8N3V7 929 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 FBXO15Q8NCQ5 510 aaPredicted RBP17.94■□□□□ 0.46
CLK1-205ENST00000434813 OR7G3Q8NG95 312 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 CHTF18Q8WVB6 975 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 THAP11Q96EK4 314 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 CHST8Q9H2A9 424 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 TRIT1Q9H3H1 467 aaKnown RBP17.94■□□□□ 0.46
CLK1-205ENST00000434813 EPHX3Q9H6B9 360 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 BTBD3Q9Y2F9 522 aa17.94■□□□□ 0.46
CLK1-205ENST00000434813 MYOGP15173 224 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 CCNA2P20248 432 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 FPR1P21462 350 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 AGXTP21549 392 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 PPIBP23284 216 aaKnown RBP17.93■□□□□ 0.46
CLK1-205ENST00000434813 HOXA9P31269 272 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 HPCAL1P37235 193 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 ENTPD1P49961 510 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 ARHGDIAP52565 204 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 NFATC3Q12968 1075 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 GRIN2CQ14957 1233 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 POM121L1PQ3SYA9 428 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 PRSS36Q5K4E3 855 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 ANKRD26P1Q6NSI1 321 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 SPRED2Q7Z698 418 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 CYP4Z1Q86W10 505 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 SETD9Q8NE22 299 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 HUS1BQ8NHY5 278 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 DTD2Q96FN9 168 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms