RNA–Protein interactions for RNA: ENST00000429374.5

HDAC10-204, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-204ENST00000429374 HMGB4Q8WW32 186 aa18.27■□□□□ 0.52
HDAC10-204ENST00000429374 DNAJC9Q8WXX5 260 aa18.27■□□□□ 0.52
HDAC10-204ENST00000429374 SH3KBP1Q96B97 665 aa18.27■□□□□ 0.52
HDAC10-204ENST00000429374 KCTD14Q9BQ13 255 aaPredicted RBP18.27■□□□□ 0.52
HDAC10-204ENST00000429374 FAM120CQ9NX05 1096 aaKnown RBP18.27■□□□□ 0.52
HDAC10-204ENST00000429374 TRNAU1APQ9NX07 287 aaKnown RBP18.27■□□□□ 0.52
HDAC10-204ENST00000429374 WBP11Q9Y2W2 641 aaKnown RBP18.27■□□□□ 0.52
HDAC10-204ENST00000429374 PCDHB3Q9Y5E6 796 aa18.27■□□□□ 0.52
HDAC10-204ENST00000429374 SNX13Q9Y5W8 968 aa18.27■□□□□ 0.52
HDAC10-204ENST00000429374 CFAP20Q9Y6A4 193 aaKnown RBP18.27■□□□□ 0.52
HDAC10-204ENST00000429374 SEMA3DO95025 777 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 CAPNS1P04632 268 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 UMPSP11172 480 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 MTHFD1P11586 935 aaKnown RBP18.27■□□□□ 0.51
HDAC10-204ENST00000429374 CDH1P12830 882 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 CD72P21854 359 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 TIA1P31483 386 aaKnown RBP eCLIP18.27■□□□□ 0.51
HDAC10-204ENST00000429374 KIR3DL1P43629 444 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 RABIFP47224 123 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 CLDN2P57739 230 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 RAE1P78406 368 aaKnown RBP18.27■□□□□ 0.51
HDAC10-204ENST00000429374 CCDC85BQ15834 202 aaPredicted RBP18.27■□□□□ 0.51
HDAC10-204ENST00000429374 RUNDC3AQ59EK9 446 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 RABL3Q5HYI8 236 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 KIAA0895LQ68EN5 471 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 METTL4Q8N3J2 472 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 C1orf52Q8N6N3 182 aaKnown RBP18.27■□□□□ 0.51
HDAC10-204ENST00000429374 OR1E3Q8WZA6 343 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 PRPF18Q99633 342 aaKnown RBP18.27■□□□□ 0.51
HDAC10-204ENST00000429374 ARMC1Q9NVT9 282 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 AHSPQ9NZD4 102 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 TAC3Q9UHF0 121 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 PLAGL1Q9UM63 463 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 AP4S1Q9Y587 144 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 PCDHB11Q9Y5F2 797 aa18.27■□□□□ 0.51
HDAC10-204ENST00000429374 PDZK1P1A8MUH7 402 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 ZNF217O75362 1048 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 ETHE1O95571 254 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 ACADSP16219 412 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 HRH2P25021 359 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 RPL3P39023 403 aaKnown RBP18.26■□□□□ 0.51
HDAC10-204ENST00000429374 ERFP50548 548 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 PHC1P78364 1004 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 ABATP80404 500 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 REEP5Q00765 189 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 PRDX1Q06830 199 aaKnown RBP18.26■□□□□ 0.51
HDAC10-204ENST00000429374 KRT33BQ14525 404 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 RNF175Q8N4F7 328 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 CATSPER1Q8NEC5 780 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 POP5Q969H6 163 aaKnown RBP18.26■□□□□ 0.51
HDAC10-204ENST00000429374 NELL2Q99435 816 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 PAIP1Q9H074 479 aaKnown RBP18.26■□□□□ 0.51
HDAC10-204ENST00000429374 CHRDQ9H2X0 955 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 CD93Q9NPY3 652 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 SERHLQ9NQF3 203 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 VAPAQ9P0L0 249 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 PLEKHM1Q9Y4G2 1056 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 NEUROG3Q9Y4Z2 214 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 DGKBQ9Y6T7 804 aa18.26■□□□□ 0.51
HDAC10-204ENST00000429374 ANXA4P09525 319 aaPredicted RBP18.25■□□□□ 0.51
HDAC10-204ENST00000429374 HOXB9P17482 250 aaPredicted RBP18.25■□□□□ 0.51
HDAC10-204ENST00000429374 ATP6V1C1P21283 382 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 GSTM2P28161 218 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 MAP7Q14244 749 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 TAF11Q15544 211 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 MTX3Q5HYI7 312 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 PTCRAQ6ISU1 281 aaPredicted RBP18.25■□□□□ 0.51
HDAC10-204ENST00000429374 PGBD3Q8N328 593 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 TMEM132CQ8N3T6 1108 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 LINC01555Q8NAE3 123 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 CLHC1Q8NHS4 586 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.25■□□□□ 0.51
HDAC10-204ENST00000429374 ZFPM2Q8WW38 1151 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 SHDQ96IW2 340 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 EGLN2Q96KS0 407 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 PPM1MQ96MI6 270 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 CCDC115Q96NT0 180 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 ZNF184Q99676 751 aaPredicted RBP18.25■□□□□ 0.51
HDAC10-204ENST00000429374 MYOCQ99972 504 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 LMAN1LQ9HAT1 526 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 CCM2LQ9NUG4 571 aaPredicted RBP18.25■□□□□ 0.51
HDAC10-204ENST00000429374 IMP3Q9NV31 184 aaKnown RBP18.25■□□□□ 0.51
HDAC10-204ENST00000429374 WSB2Q9NYS7 404 aaPredicted RBP18.25■□□□□ 0.51
HDAC10-204ENST00000429374 MAGEL2Q9UJ55 1249 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 GMEB1Q9Y692 573 aa18.25■□□□□ 0.51
HDAC10-204ENST00000429374 ANKDD1BA6NHY2 528 aa18.24■□□□□ 0.51
HDAC10-204ENST00000429374 SOX1O00570 391 aaPredicted RBP18.24■□□□□ 0.51
HDAC10-204ENST00000429374 PRICKLE3O43900 615 aaPredicted RBP18.24■□□□□ 0.51
HDAC10-204ENST00000429374 IGHV4-34P06331 123 aa18.24■□□□□ 0.51
HDAC10-204ENST00000429374 GPIP06744 558 aa18.24■□□□□ 0.51
HDAC10-204ENST00000429374 STARD6P59095 220 aa18.24■□□□□ 0.51
HDAC10-204ENST00000429374 SRP54P61011 504 aaKnown RBP18.24■□□□□ 0.51
HDAC10-204ENST00000429374 YBX1P67809 324 aaKnown RBP18.24■□□□□ 0.51
HDAC10-204ENST00000429374 ZNF763Q0D2J5 394 aa18.24■□□□□ 0.51
HDAC10-204ENST00000429374 UGT8Q16880 541 aa18.24■□□□□ 0.51
HDAC10-204ENST00000429374 OGFRL1Q5TC84 451 aaPredicted RBP18.24■□□□□ 0.51
HDAC10-204ENST00000429374 ICE2Q659A1 982 aa18.24■□□□□ 0.51
HDAC10-204ENST00000429374 DUS1LQ6P1R4 473 aaKnown RBP18.24■□□□□ 0.51
HDAC10-204ENST00000429374 ADCY4Q8NFM4 1077 aa18.24■□□□□ 0.51
HDAC10-204ENST00000429374 TTLQ8NG68 377 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms