RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 NARSO43776 548 aaKnown RBP11.51□□□□□ -0.57
PTPRN-204ENST00000423636 CDH1P12830 882 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 MMP12P39900 470 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 GALK1P51570 392 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 LRRC74AQ0VAA2 488 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 GANABQ14697 944 aaKnown RBP11.51□□□□□ -0.57
PTPRN-204ENST00000423636 CTU2Q2VPK5 515 aaKnown RBP11.51□□□□□ -0.57
PTPRN-204ENST00000423636 PSRC1Q6PGN9 363 aaPredicted RBP11.51□□□□□ -0.57
PTPRN-204ENST00000423636 R3HCC1LQ7Z5L2 792 aaKnown RBP11.51□□□□□ -0.57
PTPRN-204ENST00000423636 SNX29P2Q8IUI4 249 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 ZDHHC21Q8IVQ6 265 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 ARSGQ96EG1 525 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 CPEB1Q9BZB8 566 aaKnown RBP11.51□□□□□ -0.57
PTPRN-204ENST00000423636 MAGEL2Q9UJ55 1249 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 A0A1W2PP55 124 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 H7BY64 318 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 GFYI3L273 518 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 MID1O15344 667 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 DEAF1O75398 565 aaPredicted RBP11.51□□□□□ -0.57
PTPRN-204ENST00000423636 ATE1O95260 518 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 C6orf47O95873 294 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 SOD1P00441 154 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 IL6P05231 212 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 RAP2AP10114 183 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 TGFBR1P36897 503 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 CAPGP40121 348 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 SLC6A12P48065 614 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 NR1H2P55055 460 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 TFF2Q03403 129 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 APOFQ13790 326 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 RIMKLAQ8IXN7 391 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 PRAP1Q96NZ9 151 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 LYSMD1Q96S90 227 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 UHRF1Q96T88 793 aaPredicted RBP11.51□□□□□ -0.57
PTPRN-204ENST00000423636 MBNL1Q9NR56 388 aaKnown RBP11.51□□□□□ -0.57
PTPRN-204ENST00000423636 SCHIP1Q9P0W5 487 aaPredicted RBP11.51□□□□□ -0.57
PTPRN-204ENST00000423636 TAC3Q9UHF0 121 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 SH3GLB1Q9Y371 365 aa11.51□□□□□ -0.57
PTPRN-204ENST00000423636 MTCL1Q9Y4B5 1905 aaKnown RBP11.51□□□□□ -0.57
PTPRN-204ENST00000423636 TANC1Q9C0D5 1861 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.5□□□□□ -0.57
PTPRN-204ENST00000423636 SLC31A1O15431 190 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 SH3BP5O60239 455 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 NUAK1O60285 661 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 TPST2O60704 377 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 THRBP10828 461 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 PLA2G16P53816 162 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 ROR2Q01974 943 aaKnown RBP11.5□□□□□ -0.57
PTPRN-204ENST00000423636 GPM6BQ13491 265 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 ANKDD1AQ495B1 522 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 HEATR4Q86WZ0 1026 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 PTRH1Q86Y79 214 aaKnown RBP11.5□□□□□ -0.57
PTPRN-204ENST00000423636 TMEM132CQ8N3T6 1108 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 CLP1Q92989 425 aaKnown RBP11.5□□□□□ -0.57
PTPRN-204ENST00000423636 CCM2Q9BSQ5 444 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 RUBCNLQ9H714 662 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 DYRK4Q9NR20 520 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 DENND4CQ5VZ89 1909 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 CATP04040 527 aaKnown RBP11.5□□□□□ -0.57
PTPRN-204ENST00000423636 C8GP07360 202 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 CISD3P0C7P0 127 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 ACP5P13686 325 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 MAP2K4P45985 399 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 HSPA13P48723 471 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 CLDN8P56748 225 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 TAS2R50P59544 299 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 PRSS36Q5K4E3 855 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 C9orf64Q5T6V5 341 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 LYPLAL1Q5VWZ2 237 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 ARMCX6Q7L4S7 300 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 GPR141Q7Z602 305 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 NPAS3Q8IXF0 933 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 DPP10Q8N608 796 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 AMER3Q8N944 861 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 FLCNQ8NFG4 579 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 BPIFB1Q8TDL5 484 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 RAB8BQ92930 207 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 ABTB1Q969K4 478 aaPredicted RBP11.5□□□□□ -0.57
PTPRN-204ENST00000423636 NUS1Q96E22 293 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 CEP295NLQ96MC4 621 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 YIPF4Q9BSR8 244 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 TMEM184CQ9NVA4 438 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 FZD4Q9ULV1 537 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 SNRNP200O75643 2136 aaKnown RBP11.5□□□□□ -0.57
PTPRN-204ENST00000423636 KIAA0355O15063 1070 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 MATN1P21941 496 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 RAE1P78406 368 aaKnown RBP11.5□□□□□ -0.57
PTPRN-204ENST00000423636 HTRA4P83105 476 aaPredicted RBP11.5□□□□□ -0.57
PTPRN-204ENST00000423636 BNIP3Q12983 259 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 DAG1Q14118 895 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 RAB39AQ14964 217 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 RPS26P11Q5JNZ5 115 aaPredicted RBP11.5□□□□□ -0.57
PTPRN-204ENST00000423636 B3GNT6Q6ZMB0 384 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 TECPR1Q7Z6L1 1165 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 OR4A15Q8NGL6 344 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 C12orf43Q96C57 262 aaKnown RBP11.5□□□□□ -0.57
PTPRN-204ENST00000423636 F2RL3Q96RI0 385 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 DUSP26Q9BV47 211 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 RBM38Q9H0Z9 239 aaKnown RBP11.5□□□□□ -0.57
PTPRN-204ENST00000423636 EPS8L2Q9H6S3 715 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms