RNA–Protein interactions for RNA: ENST00000422939.1

TRPS1-204, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-204ENST00000422939 MAGED1Q9Y5V3 778 aaPredicted RBP4.41□□□□□ -1.7
TRPS1-204ENST00000422939 EIF4G1Q04637 1599 aaKnown RBP4.4□□□□□ -1.7
TRPS1-204ENST00000422939 CASTOR2A6NHX0 329 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 TFECO14948 347 aaPredicted RBP4.4□□□□□ -1.71
TRPS1-204ENST00000422939 ADAM20O43506 726 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 HPRP00739 348 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 HSP90AB1P08238 724 aaKnown RBP4.4□□□□□ -1.71
TRPS1-204ENST00000422939 ELAVL4P26378 380 aaKnown RBP4.4□□□□□ -1.71
TRPS1-204ENST00000422939 OR3A2P47893 321 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 IRX4P78413 519 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 TRIM29Q14134 588 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 BECN1Q14457 450 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 VWC2Q2TAL6 325 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 NAA16Q6N069 864 aaPredicted RBP4.4□□□□□ -1.71
TRPS1-204ENST00000422939 GDPGP1Q6ZNW5 385 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 CHMP1BQ7LBR1 199 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 ZFAND4Q86XD8 727 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 TTC30BQ8N4P2 665 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 POM121L12Q8N7R1 296 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 TC2NQ8N9U0 490 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 AVL9Q8NBF6 648 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 NOA1Q8NC60 698 aaKnown RBP4.4□□□□□ -1.71
TRPS1-204ENST00000422939 ATP6V1E2Q96A05 226 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 ATXN7L3BQ96GX2 97 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 RADILQ96JH8 1075 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 TXLNGYQ9BZA5 131 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 MTHFD2LQ9H903 347 aaPredicted RBP4.4□□□□□ -1.71
TRPS1-204ENST00000422939 CNOT10Q9H9A5 744 aaKnown RBP4.4□□□□□ -1.71
TRPS1-204ENST00000422939 KAT6BQ8WYB5 2073 aa4.4□□□□□ -1.71
TRPS1-204ENST00000422939 A0A1W2PPK0 400 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 C2CD4DB7Z1M9 353 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 TBCAO75347 108 aaKnown RBP4.39□□□□□ -1.71
TRPS1-204ENST00000422939 ATP1B1P05026 303 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 CD27P26842 260 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 PDHA2P29803 388 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 CCR3P51677 355 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 POLR2LP62875 67 aaKnown RBP4.39□□□□□ -1.71
TRPS1-204ENST00000422939 IFI35P80217 286 aaPredicted RBP4.39□□□□□ -1.71
TRPS1-204ENST00000422939 TMEM132DQ14C87 1099 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 RASA2Q15283 850 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 Q6ZR54 194 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 IL17RELQ6ZVW7 336 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 FCRLAQ7L513 359 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 ZER1Q7Z7L7 766 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 SLC39A11Q8N1S5 342 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 KLHDC1Q8N7A1 406 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 CNRIP1Q96F85 164 aaPredicted RBP4.39□□□□□ -1.71
TRPS1-204ENST00000422939 C2orf48Q96LS8 159 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 LGMNQ99538 433 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 RPP25Q9BUL9 199 aaKnown RBP4.39□□□□□ -1.71
TRPS1-204ENST00000422939 APOL6Q9BWW8 343 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 GNB4Q9HAV0 340 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 ZCCHC17Q9NP64 241 aaKnown RBP4.39□□□□□ -1.71
TRPS1-204ENST00000422939 MORF4L1Q9UBU8 362 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 PRDM4Q9UKN5 801 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 RARRES3Q9UL19 164 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 SELENOKQ9Y6D0 94 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 NISCHQ9Y2I1 1504 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 IGSF1Q8N6C5 1336 aa4.39□□□□□ -1.71
TRPS1-204ENST00000422939 ZNF318Q5VUA4 2279 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 EDDM13A0A1B0GTR0 161 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 A8MXK9 166 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 H7C0S8 307 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 BCL2L11O43521 198 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 CSN3P07498 182 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 NR2F1P10589 423 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 EPCAMP16422 314 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 ITIH1P19827 911 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 CD22P20273 847 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 PCGF2P35227 344 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 LIMK2P53671 638 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 ROR1Q01973 937 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 PEX6Q13608 980 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 NPTX1Q15818 432 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 TMEM266Q2M3C6 531 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 BMP2KLQ5H9B9 411 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 DET1Q7L5Y6 550 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 ABHD12Q8N2K0 398 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 FBXL16Q8N461 479 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 NKAIN3Q8N8D7 197 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 PIK3R3Q92569 461 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 PDLIM5Q96HC4 596 aaKnown RBP4.38□□□□□ -1.71
TRPS1-204ENST00000422939 CPNE1Q99829 537 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 GSN-AS1Q9NRJ2 163 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 CTSZQ9UBR2 303 aa4.38□□□□□ -1.71
TRPS1-204ENST00000422939 ELF5Q9UKW6 265 aaPredicted RBP4.38□□□□□ -1.71
TRPS1-204ENST00000422939 ACOD1A6NK06 481 aa4.37□□□□□ -1.71
TRPS1-204ENST00000422939 NPIPB9F8W1W9 429 aa4.37□□□□□ -1.71
TRPS1-204ENST00000422939 LIMK1P53667 647 aa4.37□□□□□ -1.71
TRPS1-204ENST00000422939 CLDN15P56746 228 aa4.37□□□□□ -1.71
TRPS1-204ENST00000422939 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
TRPS1-204ENST00000422939 LCLAT1Q6UWP7 414 aa4.37□□□□□ -1.71
TRPS1-204ENST00000422939 SLC47A2Q86VL8 602 aa4.37□□□□□ -1.71
TRPS1-204ENST00000422939 VSIG1Q86XK7 387 aa4.37□□□□□ -1.71
TRPS1-204ENST00000422939 MAML2Q8IZL2 1156 aaPredicted RBP4.37□□□□□ -1.71
TRPS1-204ENST00000422939 RYBPQ8N488 228 aaPredicted RBP4.37□□□□□ -1.71
TRPS1-204ENST00000422939 RASGEF1AQ8N9B8 481 aa4.37□□□□□ -1.71
TRPS1-204ENST00000422939 CHPT1Q8WUD6 406 aa4.37□□□□□ -1.71
TRPS1-204ENST00000422939 METTL21AQ8WXB1 218 aa4.37□□□□□ -1.71
TRPS1-204ENST00000422939 CDCA3Q99618 268 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms