RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 OR56A3Q8NH54 315 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 FBXO25Q8TCJ0 367 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 MIEF2Q96C03 454 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 MMABQ96EY8 250 aaPredicted RBP25.03■■□□□ 1.6
VEGFA-207ENST00000413642 VPS39Q96JC1 886 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 OR4K3Q96R72 315 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 YIPF2Q9BWQ6 316 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 MFRPQ9BY79 579 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 UNKQ9C0B0 810 aaKnown RBP25.03■■□□□ 1.6
VEGFA-207ENST00000413642 PCBD2Q9H0N5 130 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 RHOJQ9H4E5 214 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 CAB39LQ9H9S4 337 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 ZNF282Q9UDV7 671 aaPredicted RBP25.03■■□□□ 1.6
VEGFA-207ENST00000413642 NXT1Q9UKK6 140 aaKnown RBP25.03■■□□□ 1.6
VEGFA-207ENST00000413642 MED13Q9UHV7 2174 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 TCRBV9S1A1TA0A576 114 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 AGPSO00116 658 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 LCMT2O60294 686 aaKnown RBP25.02■■□□□ 1.6
VEGFA-207ENST00000413642 ZGLP1P0C6A0 271 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 BCL6P41182 706 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 MEF2AQ02078 507 aaPredicted RBP25.02■■□□□ 1.6
VEGFA-207ENST00000413642 OCA2Q04671 838 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 CAPN13Q6MZZ7 669 aaPredicted RBP25.02■■□□□ 1.6
VEGFA-207ENST00000413642 CCDC25Q86WR0 208 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 GALNT16Q8N428 558 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 AMER3Q8N944 861 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 CLEC1AQ8NC01 280 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 FBXL8Q96CD0 374 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 CRB3Q9BUF7 120 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 TRIM54Q9BYV2 358 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 CLMPQ9H6B4 373 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 LUZP4Q9P127 313 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 TRPC4Q9UBN4 977 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 ZNF451Q9Y4E5 1061 aa25.02■■□□□ 1.6
VEGFA-207ENST00000413642 TNRC6AQ8NDV7 1962 aaKnown RBP25.02■■□□□ 1.6
VEGFA-207ENST00000413642 ESYT3A0FGR9 886 aa25.01■■□□□ 1.59
VEGFA-207ENST00000413642 C1QAP02745 245 aa25.01■■□□□ 1.59
VEGFA-207ENST00000413642 HRH2P25021 359 aa25.01■■□□□ 1.59
VEGFA-207ENST00000413642 AP1S2P56377 157 aa25.01■■□□□ 1.59
VEGFA-207ENST00000413642 MAT1AQ00266 395 aaKnown RBP25.01■■□□□ 1.59
VEGFA-207ENST00000413642 DSG2Q14126 1118 aa25.01■■□□□ 1.59
VEGFA-207ENST00000413642 RBBP7Q16576 425 aa25.01■■□□□ 1.59
VEGFA-207ENST00000413642 PPP1R3AQ16821 1122 aa25.01■■□□□ 1.59
VEGFA-207ENST00000413642 GARNL3Q5VVW2 1013 aa25.01■■□□□ 1.59
VEGFA-207ENST00000413642 C3orf62Q6ZUJ4 267 aa25.01■■□□□ 1.59
VEGFA-207ENST00000413642 SPATA6LQ8N4H0 392 aa25.01■■□□□ 1.59
VEGFA-207ENST00000413642 SMAD5Q99717 465 aaKnown RBP25.01■■□□□ 1.59
VEGFA-207ENST00000413642 NSMCE4AQ9NXX6 385 aa25.01■■□□□ 1.59
VEGFA-207ENST00000413642 CDC14AQ9UNH5 594 aa25.01■■□□□ 1.59
VEGFA-207ENST00000413642 PLAAQ9Y263 795 aa25.01■■□□□ 1.59
VEGFA-207ENST00000413642 IGLV3-12A0A075B6K2 115 aa25■■□□□ 1.59
VEGFA-207ENST00000413642 KCNE1BA0A087WTH5 132 aa25■■□□□ 1.59
VEGFA-207ENST00000413642 PABPN1LA6NDY0 278 aaKnown RBP25■■□□□ 1.59
VEGFA-207ENST00000413642 CCND1P24385 295 aa25■■□□□ 1.59
VEGFA-207ENST00000413642 SLC26A3P40879 764 aa25■■□□□ 1.59
VEGFA-207ENST00000413642 RPS15AP62244 130 aaKnown RBP25■■□□□ 1.59
VEGFA-207ENST00000413642 FOXK1P85037 733 aa25■■□□□ 1.59
VEGFA-207ENST00000413642 PRSS41Q7RTY9 318 aa25■■□□□ 1.59
VEGFA-207ENST00000413642 NKAPQ8N5F7 415 aaKnown RBP25■■□□□ 1.59
VEGFA-207ENST00000413642 RBMXL3Q8N7X1 1067 aaKnown RBP25■■□□□ 1.59
VEGFA-207ENST00000413642 LRRC1Q9BTT6 524 aa25■■□□□ 1.59
VEGFA-207ENST00000413642 DRC3Q9H069 523 aa25■■□□□ 1.59
VEGFA-207ENST00000413642 RAB17Q9H0T7 212 aa25■■□□□ 1.59
VEGFA-207ENST00000413642 ZNF552Q9H707 407 aaPredicted RBP25■■□□□ 1.59
VEGFA-207ENST00000413642 ATP13A2Q9NQ11 1180 aa25■■□□□ 1.59
VEGFA-207ENST00000413642 SEMA3GQ9NS98 782 aa25■■□□□ 1.59
VEGFA-207ENST00000413642 C3orf18Q9UK00 162 aa25■■□□□ 1.59
VEGFA-207ENST00000413642 CCDC88CQ9P219 2028 aa25■■□□□ 1.59
VEGFA-207ENST00000413642 FAM159BA6NKW6 160 aa24.99■■□□□ 1.59
VEGFA-207ENST00000413642 TXNDC9O14530 226 aa24.99■■□□□ 1.59
VEGFA-207ENST00000413642 URI1O94763 535 aaPredicted RBP24.99■■□□□ 1.59
VEGFA-207ENST00000413642 IGHEP01854 428 aa24.99■■□□□ 1.59
VEGFA-207ENST00000413642 ENO2P09104 434 aaPredicted RBP24.99■■□□□ 1.59
VEGFA-207ENST00000413642 MYBPC3Q14896 1274 aa24.99■■□□□ 1.59
VEGFA-207ENST00000413642 C18orf21Q32NC0 220 aaPredicted RBP24.99■■□□□ 1.59
VEGFA-207ENST00000413642 CATSPEREQ5SY80 951 aa24.99■■□□□ 1.59
VEGFA-207ENST00000413642 PARP9Q8IXQ6 854 aa24.99■■□□□ 1.59
VEGFA-207ENST00000413642 OR11G2Q8NGC1 345 aa24.99■■□□□ 1.59
VEGFA-207ENST00000413642 OR9A4Q8NGU2 314 aa24.99■■□□□ 1.59
VEGFA-207ENST00000413642 C8orf44Q96CB5 159 aa24.99■■□□□ 1.59
VEGFA-207ENST00000413642 MVB12AQ96EY5 273 aa24.99■■□□□ 1.59
VEGFA-207ENST00000413642 HAUS8Q9BT25 410 aa24.99■■□□□ 1.59
VEGFA-207ENST00000413642 SPNS1Q9H2V7 528 aa24.99■■□□□ 1.59
VEGFA-207ENST00000413642 GPAMQ9HCL2 828 aa24.99■■□□□ 1.59
VEGFA-207ENST00000413642 G3BP2Q9UN86 482 aaKnown RBP24.99■■□□□ 1.59
VEGFA-207ENST00000413642 NOVA2Q9UNW9 492 aaKnown RBP24.99■■□□□ 1.59
VEGFA-207ENST00000413642 PCDHGB7Q9Y5F8 929 aa24.99■■□□□ 1.59
VEGFA-207ENST00000413642 PHGDHO43175 533 aaKnown RBP24.98■■□□□ 1.59
VEGFA-207ENST00000413642 FAM155BO75949 473 aa24.98■■□□□ 1.59
VEGFA-207ENST00000413642 WISP3O95389 354 aaPredicted RBP24.98■■□□□ 1.59
VEGFA-207ENST00000413642 MAGEA4P43358 317 aa24.98■■□□□ 1.59
VEGFA-207ENST00000413642 CD97P48960 835 aa24.98■■□□□ 1.59
VEGFA-207ENST00000413642 TSNQ15631 228 aaKnown RBP24.98■■□□□ 1.59
VEGFA-207ENST00000413642 VWA5B1Q5TIE3 1220 aa24.98■■□□□ 1.59
VEGFA-207ENST00000413642 KCT2Q8NC54 265 aa24.98■■□□□ 1.59
VEGFA-207ENST00000413642 ZNF740Q8NDX6 193 aa24.98■■□□□ 1.59
VEGFA-207ENST00000413642 ZCCHC10Q8TBK6 192 aa24.98■■□□□ 1.59
VEGFA-207ENST00000413642 ATL1Q8WXF7 558 aa24.98■■□□□ 1.59
VEGFA-207ENST00000413642 NACC2Q96BF6 587 aa24.98■■□□□ 1.59
VEGFA-207ENST00000413642 TM4SF19Q96DZ7 209 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms