RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 EFCAB7A8K855 629 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 A8MT66 165 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 C9orf172C9J069 976 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 E7EQ34 232 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 STMND1H3BQB6 276 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 KLF11O14901 512 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 POLR1CO15160 346 aaPredicted RBP7.2□□□□□ -1.26
USP16-204ENST00000399976 EPORP19235 508 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 ARL4DP49703 201 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 IRF9Q00978 393 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 MEF2AQ02078 507 aaPredicted RBP7.2□□□□□ -1.26
USP16-204ENST00000399976 TUBB3Q13509 450 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 NAE1Q13564 534 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 FASTKQ14296 549 aaKnown RBP7.2□□□□□ -1.26
USP16-204ENST00000399976 KRT71Q3SY84 523 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 AMZ1Q400G9 498 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 ZNF678Q5SXM1 525 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 PHF19Q5T6S3 580 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 TRIM42Q8IWZ5 723 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 CYP4X1Q8N118 509 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 ZNF248Q8NDW4 579 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 CFAP61Q8NHU2 1237 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 FAM76AQ8TAV0 307 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 ZNF764Q96H86 408 aaPredicted RBP7.2□□□□□ -1.26
USP16-204ENST00000399976 TAC3Q9UHF0 121 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 PCDHGA11Q9Y5H2 935 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 SUPT3HB4E1H0 165 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 HYAL3O43820 417 aaPredicted RBP7.2□□□□□ -1.26
USP16-204ENST00000399976 SUPT3HO75486 399 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 FGF4P08620 206 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 TYRP1P17643 537 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 ABCG1P45844 678 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 MC1RQ01726 317 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 CUL3Q13618 768 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 HIST2H2ACQ16777 129 aaPredicted RBP7.2□□□□□ -1.26
USP16-204ENST00000399976 HIST2H2AA3Q6FI13 130 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 TMEM214Q6NUQ4 689 aaKnown RBP7.2□□□□□ -1.26
USP16-204ENST00000399976 FBXO42Q6P3S6 717 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 NAPRTQ6XQN6 538 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 MCATQ8IVS2 390 aaKnown RBP7.2□□□□□ -1.26
USP16-204ENST00000399976 PARP9Q8IXQ6 854 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 GAL3ST3Q96A11 431 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 EGFL8Q99944 293 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 DPH7Q9BTV6 452 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 XKR8Q9H6D3 395 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 PCMTD2Q9NV79 361 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 C14orf105Q9NVL8 296 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 TMEM216Q9P0N5 145 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 SDK2Q58EX2 2172 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 TRBV23OR9-2A0A075B6M9 112 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 A0A088AWK7 358 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 NSA2O95478 260 aaKnown RBP7.2□□□□□ -1.26
USP16-204ENST00000399976 MYL2P10916 166 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 MYF5P13349 255 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 KRT4P19013 534 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 ZNF10P21506 573 aaPredicted RBP7.2□□□□□ -1.26
USP16-204ENST00000399976 GRK2P25098 689 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 KCNC1P48547 511 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 TGM3Q08188 693 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 FOXC1Q12948 553 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 CSTF3Q12996 717 aaKnown RBP7.2□□□□□ -1.26
USP16-204ENST00000399976 GTF2H2Q13888 395 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 HERC3Q15034 1050 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 GTF2H2CQ6P1K8 395 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 FAM92BQ6ZTR7 304 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 FRMD7Q6ZUT3 714 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 FGF11Q92914 225 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 RERGQ96A58 199 aaPredicted RBP7.2□□□□□ -1.26
USP16-204ENST00000399976 IL17FQ96PD4 163 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 RUFY1Q96T51 708 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 SELENOSQ9BQE4 189 aa7.2□□□□□ -1.26
USP16-204ENST00000399976 ZFHX2Q9C0A1 2572 aaPredicted RBP7.19□□□□□ -1.26
USP16-204ENST00000399976 A0A1B0GX78 115 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 UBXN8O00124 270 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 BRINP1O60477 761 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 KLHL41O60662 606 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 MAGP20916 626 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 STAT5AP42229 794 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 STXBP1P61764 594 aaKnown RBP7.19□□□□□ -1.26
USP16-204ENST00000399976 RGS1Q08116 209 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 LCP2Q13094 533 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 ASPGQ86U10 573 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 EXOC3L1Q86VI1 746 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 GPR135Q8IZ08 494 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 GOLGA6L1Q8N7Z2 621 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 CREB3L4Q8TEY5 395 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 NEIL2Q969S2 332 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 OR1F2PQ96R84 312 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 IQCGQ9H095 443 aaKnown RBP7.19□□□□□ -1.26
USP16-204ENST00000399976 CCDC86Q9H6F5 360 aaKnown RBP7.19□□□□□ -1.26
USP16-204ENST00000399976 MED4Q9NPJ6 270 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 GEMIN8Q9NWZ8 242 aaKnown RBP7.19□□□□□ -1.26
USP16-204ENST00000399976 OCIAD1Q9NX40 245 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 FAM8A1Q9UBU6 413 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 PLAGL1Q9UM63 463 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 UNC13CQ8NB66 2214 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 A0A1W2PPM1 405 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 VSTM2BA6NLU5 285 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 DLX3O60479 287 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 RASSF9O75901 435 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms