RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 PKP4Q99569 1192 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 EXD2Q9NVH0 621 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 BTBD3Q9Y2F9 522 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 PSIP1O75475 530 aaKnown RBP22.97■■□□□ 1.27
PABPN1-202ENST00000397276 AP2A2O94973 939 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 FGBP02675 491 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 ENGP17813 658 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 HOXD12P35452 270 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 PLA2G16P53816 162 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 DCDC1P59894 354 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 KCNC4Q03721 635 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 LIPJQ5W064 366 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 CSGALNACT1Q8TDX6 532 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 OSBPL10Q9BXB5 764 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 DGCR6LQ9BY27 220 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 AMBRA1Q9C0C7 1298 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 FAM118AQ9NWS6 357 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 IRAK3Q9Y616 596 aa22.97■■□□□ 1.27
PABPN1-202ENST00000397276 TMEM247A6NEH6 219 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 EVPLLA8MZ36 301 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 CLIC1O00299 241 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 KIAA0355O15063 1070 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 YY2O15391 372 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 DIRAS1O95057 198 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 RETP07949 1114 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 PRPH2P23942 346 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 ACSM2AQ08AH3 577 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 ACSM2BQ68CK6 577 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 R3HCC1LQ7Z5L2 792 aaKnown RBP22.96■■□□□ 1.27
PABPN1-202ENST00000397276 TMCO5AQ8N6Q1 288 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 WDR20Q8TBZ3 569 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 NELL1Q92832 810 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 PYURFQ96I23 114 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 SACM1LQ9NTJ5 587 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 PTPRSQ13332 1948 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 RANBP2P49792 3224 aaKnown RBP22.96■■□□□ 1.27
PABPN1-202ENST00000397276 KRBA1A5PL33 1030 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 K7ESM1 405 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 LAMP1P11279 417 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 PRPS1L1P21108 318 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 TMBIM6P55061 237 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 ABHD18Q0P651 414 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 TAMM41Q96BW9 452 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 REXO5Q96IC2 774 aaKnown RBP22.96■■□□□ 1.27
PABPN1-202ENST00000397276 CCM2Q9BSQ5 444 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 AASDHPPTQ9NRN7 309 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 WARS2Q9UGM6 360 aaKnown RBP22.96■■□□□ 1.27
PABPN1-202ENST00000397276 PSME2Q9UL46 239 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 PCDHGA8Q9Y5G5 932 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 NOTCH4Q99466 2003 aa22.96■■□□□ 1.27
PABPN1-202ENST00000397276 CATP04040 527 aaKnown RBP22.95■■□□□ 1.27
PABPN1-202ENST00000397276 HOXB9P17482 250 aaPredicted RBP22.95■■□□□ 1.27
PABPN1-202ENST00000397276 IMPA1P29218 277 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 BMPR1AP36894 532 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 MMP12P39900 470 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 VIPR2P41587 438 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 IL1RL1Q01638 556 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 MEP1AQ16819 746 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 NEK10Q6ZWH5 1172 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 DPPA4Q7L190 304 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 ADHFE1Q8IWW8 467 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 CFAP206Q8IYR0 622 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 FAM9CQ8IZT9 166 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 EID3Q8N140 333 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 C1orf52Q8N6N3 182 aaKnown RBP22.95■■□□□ 1.27
PABPN1-202ENST00000397276 ABHD11Q8NFV4 315 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 SPPL3Q8TCT6 385 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 TIFAQ96CG3 184 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 MBOAT4Q96T53 435 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 ZDHHC4Q9NPG8 344 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 TMEM9Q9P0T7 183 aa22.95■■□□□ 1.27
PABPN1-202ENST00000397276 XIRP2A4UGR9 3374 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 TLL1O43897 1013 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 MAN1A2O60476 641 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 DCTP40126 519 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 KCNAB2Q13303 367 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 GTF2H3Q13889 308 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 TRIM16LQ309B1 348 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 GTF2IRD2BQ6EKJ0 949 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 ERAP2Q6P179 960 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 KIAA0907Q7Z7F0 614 aaPredicted RBP22.95■■□□□ 1.26
PABPN1-202ENST00000397276 GTF2IRD2Q86UP8 949 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 TERB1Q8NA31 727 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 SH3KBP1Q96B97 665 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 CCDC138Q96M89 665 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 VPS4AQ9UN37 437 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 HTR3EA5X5Y0 456 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 WNT9AO14904 365 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 GBAP04062 536 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 WNT3P56703 355 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 PPP2R2BQ00005 443 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 DUOXA1Q1HG43 343 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 HKDC1Q2TB90 917 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 THAP5Q7Z6K1 395 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 C8orf59Q8N0T1 100 aaPredicted RBP22.95■■□□□ 1.26
PABPN1-202ENST00000397276 DNAJB8Q8NHS0 232 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 SAMD11Q96NU1 681 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 VNN3Q9NY84 501 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 DAPK2Q9UIK4 370 aa22.95■■□□□ 1.26
PABPN1-202ENST00000397276 CYP17A1P05093 508 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms