RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 GPR142Q7Z601 462 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 NUDT13Q86X67 352 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 FAM46DQ8NEK8 389 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 SLC19A2O60779 497 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 HTR1AP08908 422 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 NR2C1P13056 603 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 CDH15P55291 814 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 SGCBQ16585 318 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 ZNF181Q2M3W8 571 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 DRICH1Q6PGQ1 229 aaPredicted RBP13.62□□□□□ -0.23
COL4A3-202ENST00000396578 ORAI3Q9BRQ5 295 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 FBXW11Q9UKB1 542 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 PPM1HQ9ULR3 514 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 CCL23P55773 120 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 RAB39AQ14964 217 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 DUOXA1Q1HG43 343 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 KIAA1614Q5VZ46 1190 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 TCEAL4Q96EI5 215 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 TMEM68Q96MH6 324 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 MAPKAP1Q9BPZ7 522 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 OR2B2Q9GZK3 357 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 DUS2Q9NX74 493 aaKnown RBP13.62□□□□□ -0.23
COL4A3-202ENST00000396578 PCDHGA12O60330 932 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 BCHEP06276 602 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 RPS2P15880 293 aaKnown RBP13.62□□□□□ -0.23
COL4A3-202ENST00000396578 ZNF773Q6PK81 442 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 TMCO2Q7Z6W1 182 aaPredicted RBP13.62□□□□□ -0.23
COL4A3-202ENST00000396578 PSMG2Q969U7 264 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 PNPLA2Q96AD5 504 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 OTUB2Q96DC9 234 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 PURBQ96QR8 312 aaKnown RBP13.62□□□□□ -0.23
COL4A3-202ENST00000396578 VNN3Q9NY84 501 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 FKBPLQ9UIM3 349 aa13.62□□□□□ -0.23
COL4A3-202ENST00000396578 CHD4Q14839 1912 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 BHMG1C9JSJ3 638 aaPredicted RBP13.61□□□□□ -0.23
COL4A3-202ENST00000396578 GABRDO14764 452 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 HSPA12AO43301 675 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 HTR2AP28223 471 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 MAGEA8P43361 318 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 PTGR1Q14914 329 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 KIAA0930Q6ICG6 404 aaPredicted RBP13.61□□□□□ -0.23
COL4A3-202ENST00000396578 KCNN1Q92952 543 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 SLC22A18Q96BI1 424 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 YIPF4Q9BSR8 244 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 OR10A4Q9H209 315 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 SEC61A2Q9H9S3 476 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 SLC15A5A6NIM6 579 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 CLCA1A8K7I4 914 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 J3QRK9 145 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 VEGFAP15692 232 aaPredicted RBP13.61□□□□□ -0.23
COL4A3-202ENST00000396578 PON3Q15166 354 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 SLC36A4Q6YBV0 504 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 SLC29A4Q7RTT9 530 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 PYROXD2Q8N2H3 581 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 POGLUT1Q8NBL1 392 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 FBXL8Q96CD0 374 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 ZNF717Q9BY31 904 aaPredicted RBP13.61□□□□□ -0.23
COL4A3-202ENST00000396578 C1orf21Q9H246 121 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 IGSF9Q9P2J2 1179 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 PTBP2Q9UKA9 531 aaKnown RBP13.61□□□□□ -0.23
COL4A3-202ENST00000396578 MMP3P08254 477 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 CKMT2P17540 419 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 DSG2Q14126 1118 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 UGT8Q16880 541 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 ENAMQ9NRM1 1142 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 IFT52Q9Y366 437 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 MT-ND5P03915 603 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 GLP1RP43220 463 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.61□□□□□ -0.23
COL4A3-202ENST00000396578 DACT2Q5SW24 774 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 COMTD1Q86VU5 262 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 OR8S1Q8NH09 359 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 EIF5A2Q9GZV4 153 aaKnown RBP13.61□□□□□ -0.23
COL4A3-202ENST00000396578 ZCCHC3Q9NUD5 404 aaKnown RBP13.61□□□□□ -0.23
COL4A3-202ENST00000396578 NLGN3Q9NZ94 848 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 BORCS7-ASMTA0A0B4J1R7 106 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 PDYNP01213 254 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 HCAR3P49019 387 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 RFTN1Q14699 578 aaPredicted RBP13.61□□□□□ -0.23
COL4A3-202ENST00000396578 TRAM1Q15629 374 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 FCF1Q9Y324 198 aaKnown RBP13.61□□□□□ -0.23
COL4A3-202ENST00000396578 HTR3EA5X5Y0 456 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 GPR89AB7ZAQ6 455 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 COQ9O75208 318 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 GPR89BP0CG08 455 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 CENPSQ8N2Z9 138 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 TSNAXQ99598 290 aaKnown RBP13.61□□□□□ -0.23
COL4A3-202ENST00000396578 ASPNQ9BXN1 380 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 GOLGA2P5Q9HBQ8 144 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 PCDHB16Q9NRJ7 776 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 GTF2IRD1Q9UHL9 959 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 ZNF451Q9Y4E5 1061 aa13.61□□□□□ -0.23
COL4A3-202ENST00000396578 TNFRSF10BO14763 440 aa13.6□□□□□ -0.23
COL4A3-202ENST00000396578 INHBEP58166 350 aa13.6□□□□□ -0.23
COL4A3-202ENST00000396578 GNMTQ14749 295 aa13.6□□□□□ -0.23
COL4A3-202ENST00000396578 TREX2Q9BQ50 279 aaPredicted RBP13.6□□□□□ -0.23
COL4A3-202ENST00000396578 ZBTB26Q9HCK0 441 aa13.6□□□□□ -0.23
COL4A3-202ENST00000396578 CD93Q9NPY3 652 aa13.6□□□□□ -0.23
COL4A3-202ENST00000396578 TBCCD1Q9NVR7 557 aa13.6□□□□□ -0.23
COL4A3-202ENST00000396578 ST3GAL3Q11203 375 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms