RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 NCLNQ969V3 563 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 RAB7BQ96AH8 199 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 ZNF514Q96K75 400 aaPredicted RBP14.53□□□□□ -0.08
GPC3-202ENST00000394299 CDCA3Q99618 268 aaPredicted RBP14.53□□□□□ -0.08
GPC3-202ENST00000394299 SORBS1Q9BX66 1292 aaKnown RBP14.53□□□□□ -0.08
GPC3-202ENST00000394299 GORASP2Q9H8Y8 452 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 FZD3Q9NPG1 666 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 EXO1Q9UQ84 846 aaKnown RBP14.53□□□□□ -0.08
GPC3-202ENST00000394299 DYRK1BQ9Y463 629 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 KIAA1549LQ6ZVL6 1849 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 GNG14A0A1W2PPG7 69 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 H0YJX3 145 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 CLOCKO15516 846 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 GMNNO75496 209 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 KIR2DL1P43626 348 aaPredicted RBP14.52□□□□□ -0.08
GPC3-202ENST00000394299 TXNL4AP83876 142 aaKnown RBP14.52□□□□□ -0.08
GPC3-202ENST00000394299 MTAPQ13126 283 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 PON2Q15165 354 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 IRF4Q15306 451 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 TCEA2Q15560 299 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 ADAMTSL4Q6UY14 1074 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 SPRED1Q7Z699 444 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 CALHM3Q86XJ0 350 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 HS3ST5Q8IZT8 346 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 FBXO15Q8NCQ5 510 aaPredicted RBP14.52□□□□□ -0.08
GPC3-202ENST00000394299 FBXL20Q96IG2 436 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 DPH2Q9BQC3 489 aaPredicted RBP14.52□□□□□ -0.08
GPC3-202ENST00000394299 DPEP2Q9H4A9 486 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 WDR37Q9Y2I8 494 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 PCM1Q15154 2024 aa14.52□□□□□ -0.08
GPC3-202ENST00000394299 PIPSLA2A3N6 862 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 CREG1O75629 220 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 TFAP2AP05549 437 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 ENGP17813 658 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 PSMB5P28074 263 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 CHRNB3Q05901 458 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 CAMK2GQ13555 558 aaPredicted RBP14.52□□□□□ -0.09
GPC3-202ENST00000394299 ATG9BQ674R7 924 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 FAM180BQ6P0A1 224 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 TMEM184AQ6ZMB5 413 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 FAM47BQ8NA70 645 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 SLC5A11Q8WWX8 675 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 ELSPBP1Q96BH3 223 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 CCDC115Q96NT0 180 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 C9orf16Q9BUW7 83 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 S1PR5Q9H228 398 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 OLAHQ9NV23 265 aa14.52□□□□□ -0.09
GPC3-202ENST00000394299 CLIC1O00299 241 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 SEC24DO94855 1032 aaPredicted RBP14.51□□□□□ -0.09
GPC3-202ENST00000394299 KLHL18O94889 574 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 SNAP29O95721 258 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 SERPINA1P01009 418 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 RAP2AP10114 183 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 PCDH1Q08174 1060 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 DUOXA1Q1HG43 343 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 ZIK1Q3SY52 487 aaPredicted RBP14.51□□□□□ -0.09
GPC3-202ENST00000394299 LIN52Q52LA3 116 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 FAM98BQ52LJ0 330 aaKnown RBP14.51□□□□□ -0.09
GPC3-202ENST00000394299 ZNF385BQ569K4 471 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 NXPE4Q6UWF7 544 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 LRRTM4Q86VH4 590 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 METTL25Q8N6Q8 603 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 OR14C36Q8NHC7 312 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 CYGBQ8WWM9 190 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 TMBIM1Q969X1 311 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 MAGEB10Q96LZ2 347 aaPredicted RBP14.51□□□□□ -0.09
GPC3-202ENST00000394299 SH3GL1Q99961 368 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 CAAP1Q9H8G2 361 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 BRF2Q9HAW0 419 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 CCDC177Q9NQR7 707 aaPredicted RBP14.51□□□□□ -0.09
GPC3-202ENST00000394299 FBXL12Q9NXK8 326 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 SH3BP4Q9P0V3 963 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 PRAMEF33A0A0G2JMD5 474 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 RASAL1O95294 804 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 ABCB1P08183 1280 aaPredicted RBP14.51□□□□□ -0.09
GPC3-202ENST00000394299 FCGR1AP12314 374 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 ACP5P13686 325 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 MTHFRP42898 656 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 CLCNKAP51800 687 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 MERTKQ12866 999 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 ENPP2Q13822 863 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 E2F2Q14209 437 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 TMEM196Q5HYL7 178 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 TMTC4Q5T4D3 741 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 ZCCHC8Q6NZY4 707 aaKnown RBP14.51□□□□□ -0.09
GPC3-202ENST00000394299 PDZD3Q86UT5 571 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 MMP21Q8N119 569 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 OR4K1Q8NGD4 311 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 NELL1Q92832 810 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 DUSP26Q9BV47 211 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 ADI1Q9BV57 179 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 CD93Q9NPY3 652 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 BRWD1Q9NSI6 2320 aa14.51□□□□□ -0.09
GPC3-202ENST00000394299 GOLGA4Q13439 2230 aaKnown RBP14.5□□□□□ -0.09
GPC3-202ENST00000394299 USP34Q70CQ2 3546 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 SCAMP2O15127 329 aaKnown RBP14.5□□□□□ -0.09
GPC3-202ENST00000394299 PCDH7O60245 1069 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 MYO1DO94832 1006 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 NUDT7P0C024 238 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 IDSP22304 550 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms