RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 ING2Q9H160 280 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 CAB39LQ9H9S4 337 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 ZNF304Q9HCX3 659 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 TLK1Q9UKI8 766 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 NXT1Q9UKK6 140 aaKnown RBP11.28□□□□□ -0.6
RFC4-202ENST00000392481 CDC14AQ9UNH5 594 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 SH2B3Q9UQQ2 575 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 RUVBL1Q9Y265 456 aaKnown RBP11.28□□□□□ -0.6
RFC4-202ENST00000392481 OARD1Q9Y530 152 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 ARGFXA6NJG6 315 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 VSTM2BA6NLU5 285 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 PHGDHO43175 533 aaKnown RBP11.27□□□□□ -0.6
RFC4-202ENST00000392481 IGHEP01854 428 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 UMODP07911 640 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 ANXA5P08758 320 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 CCDC166P0CW27 439 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 CDH1P12830 882 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 OTX2P32243 289 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 GRK3P35626 688 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 HNMTP50135 292 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 CCR8P51685 355 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 RRADP55042 308 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 RAB10P61026 200 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 ATP1A4Q13733 1029 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 TSNQ15631 228 aaKnown RBP11.27□□□□□ -0.6
RFC4-202ENST00000392481 NKG7Q16617 165 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 LACTB2Q53H82 288 aaPredicted RBP11.27□□□□□ -0.6
RFC4-202ENST00000392481 CPZQ66K79 652 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 TCTN3Q6NUS6 607 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 MED25Q71SY5 747 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 VN1R4Q7Z5H5 301 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 DTWD1Q8N5C7 304 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 METTL27Q8N6F8 245 aaPredicted RBP11.27□□□□□ -0.6
RFC4-202ENST00000392481 CEP112Q8N8E3 955 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 TMEM102Q8N9M5 508 aaPredicted RBP11.27□□□□□ -0.6
RFC4-202ENST00000392481 OR4K1Q8NGD4 311 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 IFT81Q8WYA0 676 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 COL26A1Q96A83 441 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 UBXN10Q96LJ8 280 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 OR4K3Q96R72 315 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 SPSB2Q99619 263 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 ACSS2Q9NR19 701 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 CTSFQ9UBX1 484 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 MAU2Q9Y6X3 613 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 TENM4Q6N022 2769 aa11.27□□□□□ -0.6
RFC4-202ENST00000392481 CNTRLQ7Z7A1 2325 aa11.27□□□□□ -0.61
RFC4-202ENST00000392481 PEX12O00623 359 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 P2RX6O15547 441 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 PRPF4O43172 522 aaKnown RBP eCLIP11.26□□□□□ -0.61
RFC4-202ENST00000392481 FAM155BO75949 473 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 DNAJB5O75953 348 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 MMP11P24347 488 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 PHBP35232 272 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 FOXL2P58012 376 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 ATP6V0D1P61421 351 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 OCA2Q04671 838 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 CHAF1BQ13112 559 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 DSG2Q14126 1118 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 FAM53BQ14153 422 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 NDUFA9Q16795 377 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 CDKL4Q5MAI5 379 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 FRA10AC1Q70Z53 315 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 PPP1R32Q7Z5V6 425 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 CAMKVQ8NCB2 501 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 NEIL2Q969S2 332 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 TM4SF19Q96DZ7 209 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 CYTH2Q99418 400 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 FMO2Q99518 471 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 EGFL8Q99944 293 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 SARGQ9BW04 601 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 DRC3Q9H069 523 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 ZNF71Q9NQZ8 489 aaPredicted RBP11.26□□□□□ -0.61
RFC4-202ENST00000392481 NINJ2Q9NZG7 142 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 ZNF282Q9UDV7 671 aaPredicted RBP11.26□□□□□ -0.61
RFC4-202ENST00000392481 PCDHGA9Q9Y5G4 932 aaKnown RBP11.26□□□□□ -0.61
RFC4-202ENST00000392481 HEMK1Q9Y5R4 338 aaPredicted RBP11.26□□□□□ -0.61
RFC4-202ENST00000392481 BSNQ9UPA5 3926 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 FLNCQ14315 2725 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 IGLV3-12A0A075B6K2 115 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 FEZF1A0PJY2 475 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 LCMT2O60294 686 aaKnown RBP11.26□□□□□ -0.61
RFC4-202ENST00000392481 CEACAM4O75871 244 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 CD1DP15813 335 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 FBLP22087 321 aaKnown RBP11.26□□□□□ -0.61
RFC4-202ENST00000392481 CRABP2P29373 138 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 SLC26A3P40879 764 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 BCL6P41182 706 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 CCL11P51671 97 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 CSHL1Q14406 222 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 SLMAPQ14BN4 828 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 EFTUD2Q15029 972 aaKnown RBP eCLIP11.26□□□□□ -0.612e-6■■□□□ 13.5
RFC4-202ENST00000392481 TGFBIQ15582 683 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 CCDC91Q7Z6B0 441 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 THOC6Q86W42 341 aaKnown RBP11.26□□□□□ -0.61
RFC4-202ENST00000392481 GPSM1Q86YR5 675 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 TMEM151BQ8IW70 566 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 KLHDC8AQ8IYD2 350 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 SPATA6LQ8N4H0 392 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 TBC1D19Q8N5T2 526 aa11.26□□□□□ -0.61
RFC4-202ENST00000392481 MFSD9Q8NBP5 474 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms