RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 PAIP2BQ9ULR5 123 aaKnown RBP14.08□□□□□ -0.16
MSH5-201ENST00000375703 RUVBL1Q9Y265 456 aaKnown RBP14.08□□□□□ -0.16
MSH5-201ENST00000375703 PCDHB11Q9Y5F2 797 aa14.08□□□□□ -0.16
MSH5-201ENST00000375703 INSL5Q9Y5Q6 135 aa14.08□□□□□ -0.16
MSH5-201ENST00000375703 SCN8AQ9UQD0 1980 aa14.08□□□□□ -0.16
MSH5-201ENST00000375703 ANAPC1Q9H1A4 1944 aa14.08□□□□□ -0.16
MSH5-201ENST00000375703 TMEM247A6NEH6 219 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 KPNA5O15131 536 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 MRPS14O60783 128 aaKnown RBP14.07□□□□□ -0.16
MSH5-201ENST00000375703 NCS1P62166 190 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 MVKQ03426 396 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 VEZF1Q14119 521 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 PROX2Q3B8N5 592 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 TMEM236Q5W0B7 351 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.07□□□□□ -0.168e-8■□□□□ 10.5
MSH5-201ENST00000375703 PRSS48Q7RTY5 328 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 HS6ST3Q8IZP7 471 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 DYNC2LI1Q8TCX1 351 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 AUTS2Q8WXX7 1259 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 ELMO1Q92556 727 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 LGALS12Q96DT0 336 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 MCCC1Q96RQ3 725 aaPredicted RBP14.07□□□□□ -0.16
MSH5-201ENST00000375703 PRM3Q9NNZ6 103 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 FZD4Q9ULV1 537 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 BTBD3Q9Y2F9 522 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 KRBA1A5PL33 1030 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 CD22P20273 847 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 HOXD10P28358 340 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 GABRR2P28476 465 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 CCL23P55773 120 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 ITGA1P56199 1179 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 ACSM2AQ08AH3 577 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 ACSM2BQ68CK6 577 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 SNX29P2Q8IUI4 249 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 CCDC71Q8IV32 467 aaPredicted RBP14.07□□□□□ -0.16
MSH5-201ENST00000375703 TCEAL8Q8IYN2 117 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 SYNPOQ8N3V7 929 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 CPXM2Q8N436 756 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 IPCEF1Q8WWN9 437 aaPredicted RBP14.07□□□□□ -0.16
MSH5-201ENST00000375703 SH3KBP1Q96B97 665 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 DUSP26Q9BV47 211 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 RUBCNLQ9H714 662 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 FBXO8Q9NRD0 319 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 SIRT5Q9NXA8 310 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 FAM8A1Q9UBU6 413 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 B4GALT6Q9UBX8 382 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 PMF1-BGLAPU3KQ54 211 aa14.07□□□□□ -0.16
MSH5-201ENST00000375703 PITPNM1O00562 1244 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 PCDHGA12O60330 932 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 MYO1DO94832 1006 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 C9P02748 559 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 KRT20P35900 424 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 IFITM3Q01628 133 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 CREMQ03060 361 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 FAHD1Q6P587 224 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 DEFB128Q7Z7B8 93 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 THOC6Q86W42 341 aaKnown RBP14.06□□□□□ -0.16
MSH5-201ENST00000375703 OR6Q1Q8NGQ2 317 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 WDR20Q8TBZ3 569 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 TMEM169Q96HH4 297 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 HMX1Q9NP08 348 aaPredicted RBP14.06□□□□□ -0.16
MSH5-201ENST00000375703 VPS4AQ9UN37 437 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 PCDHGA4Q9Y5G9 962 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 ZNF106Q9H2Y7 1883 aaKnown RBP14.06□□□□□ -0.16
MSH5-201ENST00000375703 CASP8AP2Q9UKL3 1982 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 GABRR3A8MPY1 467 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 ZBBXA8MT70 800 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 UGDHO60701 494 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 SH3BGRLO75368 114 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 WBP4O75554 376 aaKnown RBP14.06□□□□□ -0.16
MSH5-201ENST00000375703 POP4O95707 220 aaKnown RBP14.06□□□□□ -0.16
MSH5-201ENST00000375703 NUDT7P0C024 238 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 CD36P16671 472 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 GRK3P35626 688 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 ZNF33BQ06732 778 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 CAMK2GQ13555 558 aaPredicted RBP14.06□□□□□ -0.16
MSH5-201ENST00000375703 DOC2AQ14183 400 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 HIST2H2ACQ16777 129 aaPredicted RBP14.06□□□□□ -0.16
MSH5-201ENST00000375703 C22orf39Q6P5X5 142 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 DPY19L3Q6ZPD9 716 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 AHSA2Q719I0 299 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 GPR155Q7Z3F1 870 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 CMTM8Q8IZV2 173 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 ASZ1Q8WWH4 475 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 C7orf34Q96L11 122 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 CPEB1Q9BZB8 566 aaKnown RBP14.06□□□□□ -0.16
MSH5-201ENST00000375703 ATAD3AQ9NVI7 634 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 SPATA6Q9NWH7 488 aaPredicted RBP14.06□□□□□ -0.16
MSH5-201ENST00000375703 SUV39H1O43463 412 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 ADAM23O75077 832 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 LCKP06239 509 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 BMP4P12644 408 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 MAGEA8P43361 318 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 IQCCQ4KMZ1 466 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 CPTPQ5TA50 214 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 PAGE2Q7Z2X7 111 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 PLD3Q8IV08 490 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 MFSD4AQ8N468 514 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 CPA6Q8N4T0 437 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 VPS37AQ8NEZ2 397 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms