RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 CDKN2CP42773 168 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 MAPK9P45984 424 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 Q6ZPB1 254 aaPredicted RBP17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 RNF130Q86XS8 419 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 GTF2H4Q92759 462 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TBC1D14Q9P2M4 693 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 KCNK6Q9Y257 313 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CEPT1Q9Y6K0 416 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ZNF99A8MXY4 864 aaPredicted RBP17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 VIPR1P32241 457 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TM4SF4P48230 202 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CLCNKAP51800 687 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 RAPSNQ13702 412 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SKIV2LQ15477 1246 aaKnown RBP17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SMN1Q16637 294 aaKnown RBP17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 LRRC70Q7Z2Q7 622 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 LGI4Q8N135 537 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SVOPLQ8N434 492 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 PSD4Q8NDX1 1056 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 OR14C36Q8NHC7 312 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TRIB3Q96RU7 358 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 AP3M1Q9Y2T2 418 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TFECO14948 347 aaPredicted RBP17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SOCS5O75159 536 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ATE1O95260 518 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CCSMST1Q4G0I0 132 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 DPF3Q92784 378 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 MTIF3Q9H2K0 278 aaKnown RBP17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 NEU3Q9UQ49 428 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 KPNA4O00629 521 aaPredicted RBP17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ADH1CP00326 375 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 JAK1P23458 1154 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ASMTP46597 345 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 DNASE1L3Q13609 305 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TBC1D19Q8N5T2 526 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 OR10G2Q8NGC3 310 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 STARD8Q92502 1023 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 PPP1R16AQ96I34 528 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 LHPPQ9H008 270 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 IKZF5Q9H5V7 419 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 PDFQ9HBH1 243 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SPHK2Q9NRA0 654 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ZNF225Q9UK10 706 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 H7BY64 318 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 KDELR2P33947 212 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 FPGSQ05932 587 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SCARB2Q14108 478 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TRIM71Q2Q1W2 868 aaKnown RBP17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 C9orf64Q5T6V5 341 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SDE2Q6IQ49 451 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ZNF773Q6PK81 442 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 FAM20CQ8IXL6 584 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 HUS1BQ8NHY5 278 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 PRAP1Q96NZ9 151 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SEC16AO15027 2179 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TBX1O43435 398 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 AIREO43918 545 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CDK4P11802 303 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CDH3P22223 829 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TXNL4AP83876 142 aaKnown RBP17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 RAB33AQ14088 237 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SPANXN2Q5MJ10 180 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CROCCP3Q8IVE0 287 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 C7orf57Q8NEG2 295 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TMEM165Q9HC07 324 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 BOLA2-SMG1P6H3BVE0 249 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TAPBPO15533 448 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 BCHEP06276 602 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 MYF6P23409 242 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SOX6P35712 828 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 DCTP40126 519 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CYBRD1Q53TN4 286 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 DSG4Q86SJ6 1040 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 EPHX4Q8IUS5 362 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ZNF583Q96ND8 569 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SEMA3GQ9NS98 782 aa17.1■□□□□ 0.33
TRAF3IP1-201ENST00000373327 MYL12BO14950 172 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CCNDBP1O95273 360 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 PAK4O96013 591 aaPredicted RBP17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 KRT8P05787 483 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 HRH2P25021 359 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 HNMTP50135 292 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 AP1S2P56377 157 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 NFE2L1Q14494 772 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ADNP2Q6IQ32 1131 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 KLHL35Q6PF15 583 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 PRR23BQ6ZRT6 265 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CAMKK1Q8N5S9 505 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 RAB2BQ8WUD1 216 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 HPS1Q92902 700 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CMTM7Q96FZ5 175 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 C12orf66Q96MD2 445 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 COL21A1Q96P44 957 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 KCNS3Q9BQ31 491 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CCM2Q9BSQ5 444 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CEP44Q9C0F1 390 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 GADD45GO95257 159 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 PRNPP04156 253 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 PFKLP17858 780 aa17.09■□□□□ 0.33
TRAF3IP1-201ENST00000373327 VMACQ2NL98 169 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms