RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 BLOC1S5Q8TDH9 187 aa18.47■□□□□ 0.55
CMTM3-201ENST00000361909 RNF170Q96K19 258 aa18.47■□□□□ 0.55
CMTM3-201ENST00000361909 GPR21Q99679 349 aa18.47■□□□□ 0.55
CMTM3-201ENST00000361909 PDP1Q9P0J1 537 aaPredicted RBP18.47■□□□□ 0.55
CMTM3-201ENST00000361909 PCDH10Q9P2E7 1040 aa18.47■□□□□ 0.55
CMTM3-201ENST00000361909 DNMT3LQ9UJW3 386 aa18.47■□□□□ 0.55
CMTM3-201ENST00000361909 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.47■□□□□ 0.55
CMTM3-201ENST00000361909 FAM50BQ9Y247 325 aa18.47■□□□□ 0.55
CMTM3-201ENST00000361909 RWDD3Q9Y3V2 267 aa18.47■□□□□ 0.55
CMTM3-201ENST00000361909 H3BQ06 376 aaPredicted RBP18.46■□□□□ 0.55
CMTM3-201ENST00000361909 PCDHGA12O60330 932 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 NDUFS3O75489 264 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 WDR47O94967 919 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 SEMA3DO95025 777 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 SEMG1P04279 462 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 FABP3P05413 133 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 MAXP61244 160 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 RPL38P63173 70 aaKnown RBP18.46■□□□□ 0.55
CMTM3-201ENST00000361909 SLC10A7Q0GE19 358 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 PLD1Q13393 1074 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 GTF2H3Q13889 308 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 NOXA1Q86UR1 476 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 ZNF675Q8TD23 568 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 AUTS2Q8WXX7 1259 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 SDHCQ99643 169 aaPredicted RBP18.46■□□□□ 0.55
CMTM3-201ENST00000361909 HTATIP2Q9BUP3 242 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 CCSER2Q9H7U1 834 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 NLE1Q9NVX2 485 aaPredicted RBP18.46■□□□□ 0.55
CMTM3-201ENST00000361909 TRPM5Q9NZQ8 1165 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 TBC1D24Q9ULP9 559 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 SNX6Q9UNH7 406 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 CCL27Q9Y4X3 112 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 IRAK3Q9Y616 596 aa18.46■□□□□ 0.55
CMTM3-201ENST00000361909 TLL1O43897 1013 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 TSPAN12O95859 305 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 SLC2A4P14672 509 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 RHOQP17081 205 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 CYP2A7P20853 494 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 MAGP20916 626 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 ENDOUP21128 410 aaKnown RBP18.45■□□□□ 0.54
CMTM3-201ENST00000361909 FMO4P31512 558 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 EPHB3P54753 998 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 ITGA1P56199 1179 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 RPP38P78345 283 aaKnown RBP18.45■□□□□ 0.54
CMTM3-201ENST00000361909 CAMK2GQ13555 558 aaPredicted RBP18.45■□□□□ 0.54
CMTM3-201ENST00000361909 TAF12Q16514 161 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 TBRG1Q3YBR2 411 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 BCL7AQ4VC05 210 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 ZNF367Q7RTV3 350 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 KRT73Q86Y46 540 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 DNAJC22Q8N4W6 341 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 SPERTQ8NA61 448 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 ATG16L2Q8NAA4 619 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 DNASE1L2Q92874 299 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 CDKN2AIPNLQ96HQ2 116 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 MIR1-1HGQ9H1L0 117 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 PAQR5Q9NXK6 330 aaPredicted RBP18.45■□□□□ 0.54
CMTM3-201ENST00000361909 INSL5Q9Y5Q6 135 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 ARL5AQ9Y689 179 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 SLC12A8A0AV02 714 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 CLCA1A8K7I4 914 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 CD72P21854 359 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 PSMA3P25788 255 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 HK3P52790 923 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 PLIN5Q00G26 463 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 FBXO48Q5FWF7 155 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 ARMCX4Q5H9R4 360 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 PRSS36Q5K4E3 855 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 SPANXN4Q5MJ08 99 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 WDR45BQ5MNZ6 344 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 SNAP47Q5SQN1 464 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 HECTD3Q5T447 861 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 CCNJQ5T5M9 372 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 PIK3R6Q5UE93 754 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 NEK5Q6P3R8 708 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 MSANTD1Q6ZTZ1 278 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 MIB1Q86YT6 1006 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 CCDC71Q8IV32 467 aaPredicted RBP18.45■□□□□ 0.54
CMTM3-201ENST00000361909 LIX1LQ8IVB5 337 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 CHTF18Q8WVB6 975 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 PSMG2Q969U7 264 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 OR52E6Q96RD3 313 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 REEP1Q9H902 201 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 RPRD1BQ9NQG5 326 aaKnown RBP18.45■□□□□ 0.54
CMTM3-201ENST00000361909 ASAH2Q9NR71 780 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 SPASTQ9UBP0 616 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 AP1M2Q9Y6Q5 423 aa18.45■□□□□ 0.54
CMTM3-201ENST00000361909 IGLV3-10A0A075B6K4 115 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 MYO1GB0I1T2 1018 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 CCRL2O00421 344 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 MOCS2O96007 188 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-201ENST00000361909 CNPP09543 421 aaKnown RBP18.44■□□□□ 0.54
CMTM3-201ENST00000361909 IL7P13232 177 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 CA5AP35218 305 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 CA8P35219 290 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 RGS6P49758 472 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 RACK1P63244 317 aaKnown RBP18.44■□□□□ 0.54
CMTM3-201ENST00000361909 TWF1Q12792 350 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 MS4A13Q5J8X5 152 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 ARMC4Q5T2S8 1044 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms