RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 ERVFC1P60507 584 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 ID2Q02363 134 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 EMX2Q04743 252 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 DDI2Q5TDH0 399 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 HTR3DQ70Z44 454 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 SLC29A4Q7RTT9 530 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 KBTBD8Q8NFY9 601 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 TRMT2BQ96GJ1 504 aaKnown RBP14.45□□□□□ -0.1
COL17A1-201ENST00000353479 RHBDL2Q9NX52 303 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 USP3Q9Y6I4 520 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 SEMA4FO95754 770 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.44□□□□□ -0.1
COL17A1-201ENST00000353479 KIAA0319Q5VV43 1072 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 RPTNQ6XPR3 784 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 B3GNT6Q6ZMB0 384 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 PAQR9Q6ZVX9 377 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 TMEM126BQ8IUX1 230 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 GPR65Q8IYL9 337 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 SCML4Q8N228 414 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 SHKBP1Q8TBC3 707 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 ART5Q96L15 291 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 ZNF382Q96SR6 550 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 MATN2O00339 956 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 GMPRP36959 345 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 TARDBPQ13148 414 aaKnown RBP eCLIP14.44□□□□□ -0.1
COL17A1-201ENST00000353479 ZNF234Q14588 700 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 STEAP4Q687X5 459 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 SLC30A6Q6NXT4 461 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 ENKURQ8TC29 256 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 IPCEF1Q8WWN9 437 aaPredicted RBP14.44□□□□□ -0.1
COL17A1-201ENST00000353479 RTP4Q96DX8 246 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 MOCOSQ96EN8 888 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 WASF2Q9Y6W5 498 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 ZNF860A6NHJ4 632 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 PIM1P11309 404 aaPredicted RBP14.44□□□□□ -0.1
COL17A1-201ENST00000353479 KIAA1161Q6NSJ0 714 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 RANBP10Q6VN20 620 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 CXXC5Q7LFL8 322 aaKnown RBP14.44□□□□□ -0.1
COL17A1-201ENST00000353479 SEC14L1Q92503 715 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 ZNF347Q96SE7 839 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 RIPK1Q13546 671 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 IQCHQ86VS3 1027 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 RPLP0P6Q8NHW5 317 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 RHEBL1Q8TAI7 183 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 LRCH3Q96II8 777 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 DRGXA6NNA5 263 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 C6orf47O95873 294 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 FDXRP22570 491 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 ACTR3P61158 418 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 DSC1Q08554 894 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 RBM44Q6ZP01 1051 aaKnown RBP14.44□□□□□ -0.1
COL17A1-201ENST00000353479 KCNH6Q9H252 994 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 ZBTB26Q9HCK0 441 aa14.44□□□□□ -0.1
COL17A1-201ENST00000353479 PHIPQ8WWQ0 1821 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 ARPC2O15144 300 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 C1GALT1C1LP0DN25 315 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 TBPL1P62380 186 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 PPP1R3AQ16821 1122 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 CEACAM20Q6UY09 585 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 GRHL3Q8TE85 626 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 RBCK1Q9BYM8 510 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 DNAJB9Q9UBS3 223 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 NPIPB15A6NHN6 443 aaPredicted RBP14.43□□□□□ -0.1
COL17A1-201ENST00000353479 ANGPTL1O95841 491 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 TRAP1Q12931 704 aaKnown RBP14.43□□□□□ -0.1
COL17A1-201ENST00000353479 FBXO43Q4G163 708 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 ZNF311Q5JNZ3 666 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 LIPJQ5W064 366 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 TMPRSS11AQ6ZMR5 421 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 CDHR3Q6ZTQ4 885 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 NOL6Q9H6R4 1146 aaKnown RBP14.43□□□□□ -0.1
COL17A1-201ENST00000353479 DNMT3BQ9UBC3 853 aaKnown RBP14.43□□□□□ -0.1
COL17A1-201ENST00000353479 CRNNQ9UBG3 495 aaPredicted RBP14.43□□□□□ -0.1
COL17A1-201ENST00000353479 SLC7A8Q9UHI5 535 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 LATO43561 262 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 IVDP26440 423 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 MGAT3Q09327 533 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 ZNF763Q0D2J5 394 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 NPAS3Q8IXF0 933 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 NFKBIDQ8NI38 313 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 TMEM174Q8WUU8 243 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 TP53INP1Q96A56 240 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 ZDHHC12Q96GR4 267 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 PSMD11O00231 422 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 HCN1O60741 890 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 COQ9O75208 318 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 AGR2O95994 175 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 PIK3CBP42338 1070 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 RPP38P78345 283 aaKnown RBP14.43□□□□□ -0.1
COL17A1-201ENST00000353479 NDUFAF6Q330K2 333 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 AHSA2Q719I0 299 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 SYVN1Q86TM6 617 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 KBTBD2Q8IY47 623 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 CPXM2Q8N436 756 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 TMEM74Q96NL1 305 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 IFT27Q9BW83 186 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 KCNN2Q9H2S1 579 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 LMAN1LQ9HAT1 526 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 HMG20AQ9NP66 347 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 FAM120CQ9NX05 1096 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms