RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 NT5DC2Q9H857 520 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 THUMPD1Q9NXG2 353 aaKnown RBP17.97■□□□□ 0.47
SMPD1-201ENST00000342245 STON1Q9Y6Q2 735 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 SH3D21A4FU49 640 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 PAHP00439 452 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 BTG1P62324 171 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 PITX1P78337 314 aaPredicted RBP17.96■□□□□ 0.47
SMPD1-201ENST00000342245 SP2Q02086 613 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 KCT2Q8NC54 265 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 EXOC2Q96KP1 924 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 MRGPRX2Q96LB1 330 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 KLHL15Q96M94 604 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 EXOSC4Q9NPD3 245 aaKnown RBP17.96■□□□□ 0.47
SMPD1-201ENST00000342245 SESN1Q9Y6P5 492 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 PMPCBO75439 489 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 CELF2O95319 508 aaKnown RBP17.96■□□□□ 0.47
SMPD1-201ENST00000342245 ZNF682O95780 498 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 SEMG1P04279 462 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 RAB3AP20336 220 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 NFE2L1Q14494 772 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 PGBD5Q8N414 524 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 ATPAF2Q8N5M1 289 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 OR6P1Q8NGX9 317 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 CREB3L1Q96BA8 519 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 FERD3LQ96RJ6 166 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 CPPED1Q9BRF8 314 aaPredicted RBP17.96■□□□□ 0.47
SMPD1-201ENST00000342245 NFKBIZQ9BYH8 718 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 EMC7Q9NPA0 242 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 SLC39A1Q9NY26 324 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 ZNF225Q9UK10 706 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 VPS9D1Q9Y2B5 631 aa17.96■□□□□ 0.47
SMPD1-201ENST00000342245 POLR3HQ9Y535 204 aaPredicted RBP17.96■□□□□ 0.47
SMPD1-201ENST00000342245 KHNYNO15037 678 aaKnown RBP17.95■□□□□ 0.46
SMPD1-201ENST00000342245 MATN3O15232 486 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 VIPP01282 170 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 IL1AP01583 271 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 CHRNA4P43681 627 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 CYP4F2P78329 520 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 PLIN5Q00G26 463 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 ADIGQ0VDE8 80 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 POU4F3Q15319 338 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 NR6A1Q15406 480 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 FAM187BQ17R55 369 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 TTLL9Q3SXZ7 439 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 METAP1DQ6UB28 335 aaPredicted RBP17.95■□□□□ 0.46
SMPD1-201ENST00000342245 TMEM132CQ8N3T6 1108 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 CPA6Q8N4T0 437 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 LRRC17Q8N6Y2 441 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 SLC25A46Q96AG3 418 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 SGTBQ96EQ0 304 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 SENP8Q96LD8 212 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 TEPSINQ96N21 525 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 PCYT2Q99447 389 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 ABCB9Q9NP78 766 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 SNTG1Q9NSN8 517 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 PRELID3BQ9Y3B1 194 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 RNF215Q9Y6U7 377 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 DOCK1Q14185 1865 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 ECI2O75521 394 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 PRDX3P30048 256 aaKnown RBP17.95■□□□□ 0.46
SMPD1-201ENST00000342245 AP1S2P56377 157 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 SSX1Q16384 188 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 AP5B1Q2VPB7 878 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 EIF3MQ7L2H7 374 aaKnown RBP17.95■□□□□ 0.46
SMPD1-201ENST00000342245 CREB3L4Q8TEY5 395 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 AP3S1Q92572 193 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 PGAP3Q96FM1 320 aaPredicted RBP17.95■□□□□ 0.46
SMPD1-201ENST00000342245 RADILQ96JH8 1075 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 MCCC2Q9HCC0 563 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 TMLHEQ9NVH6 421 aa17.95■□□□□ 0.46
SMPD1-201ENST00000342245 LYARQ9NX58 379 aaKnown RBP17.95■□□□□ 0.46
SMPD1-201ENST00000342245 ZNF236Q9UL36 1845 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 LCHNA4D1U4 455 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 ZNF98A6NK75 572 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 SMLR1H3BR10 107 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 FABP7O15540 132 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 PTP4A3O75365 173 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 HMBSP08397 361 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 SLC2A3P11169 496 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 NPR3P17342 541 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 WARSP23381 471 aaKnown RBP17.94■□□□□ 0.46
SMPD1-201ENST00000342245 BTN1A1Q13410 526 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 SF3A2Q15428 464 aaKnown RBP17.94■□□□□ 0.46
SMPD1-201ENST00000342245 GPR153Q6NV75 609 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 GPR150Q8NGU9 434 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 SECISBP2Q96T21 854 aaKnown RBP17.94■□□□□ 0.46
SMPD1-201ENST00000342245 MYOCQ99972 504 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 PELOQ9BRX2 385 aaKnown RBP17.94■□□□□ 0.46
SMPD1-201ENST00000342245 DPY30Q9C005 99 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 HEXA-AS1Q9H8Q6 139 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 AMBNQ9NP70 447 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 SH3BP4Q9P0V3 963 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 RIMKLBQ9ULI2 386 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 MGAT4AQ9UM21 535 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 PCDHGB3Q9Y5G1 929 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 COL4A5P29400 1685 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 LYRM1O43325 122 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 MPZL2O60487 215 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 FAM157BP0CG42 384 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 SLC2A2P11168 524 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms