RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 GAS2L1Q99501 681 aaPredicted RBP15.77■□□□□ 0.12
LITAF-201ENST00000339430 DOK1Q99704 481 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 CEP44Q9C0F1 390 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 LHPPQ9H008 270 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 MAGIXQ9H6Y5 334 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 PCDH12Q9NPG4 1184 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 USE1Q9NZ43 259 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 ABCG2Q9UNQ0 655 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 AP3M1Q9Y2T2 418 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 CXorf51AA0A1B0GTR3 108 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 ARHGEF33A8MVX0 844 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 CFAP99D6REC4 459 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 ABCB7O75027 752 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 RECQL5O94762 991 aaPredicted RBP15.77■□□□□ 0.11
LITAF-201ENST00000339430 ENGP17813 658 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 GDI1P31150 447 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 SP140Q13342 867 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 RBM48Q5RL73 367 aaKnown RBP15.77■□□□□ 0.11
LITAF-201ENST00000339430 TTC23LQ6PF05 361 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 DHRS4L2Q6PKH6 230 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 ARL10Q8N8L6 244 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 ASZ1Q8WWH4 475 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 SNX19Q92543 992 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 RDH12Q96NR8 316 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 DPH2Q9BQC3 489 aaPredicted RBP15.77■□□□□ 0.11
LITAF-201ENST00000339430 CD207Q9UJ71 328 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 ERVW-1Q9UQF0 538 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 ERVK-11Q9UQG0 969 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 TMED5Q9Y3A6 229 aa15.77■□□□□ 0.11
LITAF-201ENST00000339430 PRUNE2Q8WUY3 3088 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 EVPLLA8MZ36 301 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 hCG_2039718K7EN88 272 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 CLIC1O00299 241 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 TSPAN6O43657 245 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 NOL3O60936 208 aaKnown RBP15.76■□□□□ 0.11
LITAF-201ENST00000339430 COX7A2P14406 83 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 MAP4P27816 1152 aaKnown RBP15.76■□□□□ 0.11
LITAF-201ENST00000339430 PBLDP30039 288 aaPredicted RBP15.76■□□□□ 0.11
LITAF-201ENST00000339430 VIPR1P32241 457 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 AP1S2P56377 157 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 TMED1Q13445 227 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 NAE1Q13564 534 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 RUNX3Q13761 415 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 C16orf72Q14CZ0 275 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 CCDC85BQ15834 202 aaPredicted RBP15.76■□□□□ 0.11
LITAF-201ENST00000339430 THOC6Q86W42 341 aaKnown RBP15.76■□□□□ 0.11
LITAF-201ENST00000339430 DCP2Q8IU60 420 aaKnown RBP15.76■□□□□ 0.11
LITAF-201ENST00000339430 HDAC2Q92769 488 aaKnown RBP15.76■□□□□ 0.11
LITAF-201ENST00000339430 NECTIN4Q96NY8 510 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 AASDHPPTQ9NRN7 309 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 DEC1Q9P2X7 70 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 TMEFF2Q9UIK5 374 aaPredicted RBP15.76■□□□□ 0.11
LITAF-201ENST00000339430 C3orf18Q9UK00 162 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 SLC27A6Q9Y2P4 619 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 DENND4AQ7Z401 1863 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 MYO1GB0I1T2 1018 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 PTGES3LE9PB15 166 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 SLC16A5O15375 505 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 HTR1AP08908 422 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 CYP4B1P13584 511 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 BDKRB1P46663 353 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 CTSCP53634 463 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 BNIP3Q12983 259 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 DOC2AQ14183 400 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 DUOXA1Q1HG43 343 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 SYTL3Q4VX76 610 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 LAIR2Q6ISS4 152 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 XKR5Q6UX68 686 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 VTCN1Q7Z7D3 282 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 RAVER1Q8IY67 606 aaKnown RBP15.76■□□□□ 0.11
LITAF-201ENST00000339430 CHPFQ8IZ52 775 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 FAM9CQ8IZT9 166 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 SPARTQ8N0X7 666 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 CPA6Q8N4T0 437 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 FAM81AQ8TBF8 368 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 DGCR6LQ9BY27 220 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 VPS29Q9UBQ0 182 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 AASSQ9UDR5 926 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 PLXNA2O75051 1894 aa15.76■□□□□ 0.11
LITAF-201ENST00000339430 KIF26AQ9ULI4 1882 aaPredicted RBP15.75■□□□□ 0.11
LITAF-201ENST00000339430 YY2O15391 372 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 MAGEB3O15480 346 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 CYP2A6P11509 494 aaPredicted RBP15.75■□□□□ 0.11
LITAF-201ENST00000339430 ZNF182P17025 639 aaPredicted RBP15.75■□□□□ 0.11
LITAF-201ENST00000339430 NR4A1P22736 598 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 WNT3P56703 355 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 EPS8Q12929 822 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 MYBPC3Q14896 1274 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 CEP68Q76N32 757 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 ZC3H7AQ8IWR0 971 aaKnown RBP15.75■□□□□ 0.11
LITAF-201ENST00000339430 CNIH3Q8TBE1 160 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 CSGALNACT1Q8TDX6 532 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 SUSD6Q92537 303 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 NXPE3Q969Y0 559 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 MRGPRX3Q96LB0 322 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 TUBA1CQ9BQE3 449 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 HEPHQ9BQS7 1158 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 TRMT61BQ9BVS5 477 aaKnown RBP15.75■□□□□ 0.11
LITAF-201ENST00000339430 GALNT8Q9NY28 637 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 BTBD3Q9Y2F9 522 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms