RNA–Protein interactions for RNA: ENST00000331968.9

PRKD1-201, Transcript of protein kinase D1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKD1, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-201ENST00000331968 ISM1B1AKI9 464 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 MT-ND2P03891 347 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 TCF3P15923 654 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 PBX2P40425 430 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 MCCD1P59942 119 aaPredicted RBP13.08□□□□□ -0.32
PRKD1-201ENST00000331968 RAPSNQ13702 412 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 HKDC1Q2TB90 917 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 FBXO46Q6PJ61 603 aaPredicted RBP13.08□□□□□ -0.32
PRKD1-201ENST00000331968 TRIM48Q8IWZ4 208 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 TMEM203Q969S6 136 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 RBM4BQ9BQ04 359 aaKnown RBP13.08□□□□□ -0.32
PRKD1-201ENST00000331968 MACROD1Q9BQ69 325 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 RHNO1Q9BSD3 238 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 RBM4Q9BWF3 364 aaKnown RBP13.08□□□□□ -0.32
PRKD1-201ENST00000331968 DCSTAMPQ9H295 470 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 RMND5AQ9H871 391 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 LHX3Q9UBR4 397 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 KLHL20Q9Y2M5 609 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 KCNE2Q9Y6J6 123 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 PRUNE2Q8WUY3 3088 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 HEPACAM2A8MVW5 462 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 C5orf58C9J3I9 102 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 GSTM1P09488 218 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 ATP1B2P14415 290 aaPredicted RBP13.08□□□□□ -0.32
PRKD1-201ENST00000331968 HOXB8P17481 243 aaPredicted RBP13.08□□□□□ -0.32
PRKD1-201ENST00000331968 OR1E2P47887 323 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 ZNF605Q86T29 641 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 SETD9Q8NE22 299 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 CSGALNACT1Q8TDX6 532 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 COPS4Q9BT78 406 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 IL36AQ9UHA7 158 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 ERVW-1Q9UQF0 538 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 ALPK2Q86TB3 2170 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 A0A1W2PP55 124 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 LOC110117498-PIK3R3F6TDL0 507 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 VPS4BO75351 444 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 TNFRSF21O75509 655 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 POP7O75817 140 aaKnown RBP13.08□□□□□ -0.32
PRKD1-201ENST00000331968 PAPSS2O95340 614 aaPredicted RBP13.08□□□□□ -0.32
PRKD1-201ENST00000331968 CDH1P12830 882 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 IFI30P13284 250 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 PIGAP37287 484 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 HLCSP50747 726 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 CTSCP53634 463 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 GANABQ14697 944 aaKnown RBP13.08□□□□□ -0.32
PRKD1-201ENST00000331968 CYP2U1Q7Z449 544 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 VPS37AQ8NEZ2 397 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 OR4K1Q8NGD4 311 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 IL4I1Q96RQ9 567 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 RBM38Q9H0Z9 239 aaKnown RBP13.08□□□□□ -0.32
PRKD1-201ENST00000331968 SLC6A17Q9H1V8 727 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 TUBB1Q9H4B7 451 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 EHD1Q9H4M9 534 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 ZDHHC3Q9NYG2 299 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 KLHL3Q9UH77 587 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 DHRS7Q9Y394 339 aa13.08□□□□□ -0.32
PRKD1-201ENST00000331968 OTOFQ9HC10 1997 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 GLOD5A6NK44 160 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 RTCAO00442 366 aaKnown RBP13.07□□□□□ -0.32
PRKD1-201ENST00000331968 WNT9AO14904 365 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 APOL3O95236 402 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 CSF2P04141 144 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 DDX5P17844 614 aaKnown RBP13.07□□□□□ -0.32
PRKD1-201ENST00000331968 PDHA2P29803 388 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 HOXD12P35452 270 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 GJA8P48165 433 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 EMP3P54852 163 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 TMEM115Q12893 351 aaPredicted RBP13.07□□□□□ -0.32
PRKD1-201ENST00000331968 MTA1Q13330 715 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 SLC36A3Q495N2 470 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 CTSL3PQ5NE16 218 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 SPATA19Q7Z5L4 167 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 RGL4Q8IZJ4 473 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 DNAJC11Q9NVH1 559 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 FAM118AQ9NWS6 357 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 MSRAQ9UJ68 235 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 TBX21Q9UL17 535 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 SNX6Q9UNH7 406 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 FAM234BA2RU67 622 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 EFCAB10A6NFE3 127 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 ANKDD1BA6NHY2 528 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 ABLIM3O94929 683 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 ZNF140P52738 457 aaPredicted RBP13.07□□□□□ -0.32
PRKD1-201ENST00000331968 RPL26P61254 145 aaKnown RBP13.07□□□□□ -0.32
PRKD1-201ENST00000331968 INO80DQ53TQ3 878 aaPredicted RBP13.07□□□□□ -0.32
PRKD1-201ENST00000331968 ATAT1Q5SQI0 421 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 SFTPA1Q8IWL2 248 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 HMGCLL1Q8TB92 370 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 CLIP3Q96DZ5 547 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 WDR12Q9GZL7 423 aaKnown RBP13.07□□□□□ -0.32
PRKD1-201ENST00000331968 DERL2Q9GZP9 239 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 RHCGQ9UBD6 479 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 DNAJB9Q9UBS3 223 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 MAP4K5Q9Y4K4 846 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 SPAG17Q6Q759 2223 aa13.07□□□□□ -0.32
PRKD1-201ENST00000331968 ATG13O75143 517 aa13.06□□□□□ -0.32
PRKD1-201ENST00000331968 EPN2O95208 641 aa13.06□□□□□ -0.32
PRKD1-201ENST00000331968 ALDH3B2P48448 385 aa13.06□□□□□ -0.32
PRKD1-201ENST00000331968 MASP1P48740 699 aa13.06□□□□□ -0.32
PRKD1-201ENST00000331968 CSTF3Q12996 717 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms