RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 PTOV1Q86YD1 416 aa20.67■□□□□ 0.9
LIMS2-201ENST00000324938 PHOSPHO2Q8TCD6 241 aa20.67■□□□□ 0.9
LIMS2-201ENST00000324938 OR2AG1Q9H205 316 aa20.67■□□□□ 0.9
LIMS2-201ENST00000324938 BTNL2Q9UIR0 455 aa20.67■□□□□ 0.9
LIMS2-201ENST00000324938 C3orf18Q9UK00 162 aa20.67■□□□□ 0.9
LIMS2-201ENST00000324938 BTBD3Q9Y2F9 522 aa20.67■□□□□ 0.9
LIMS2-201ENST00000324938 CPSF4O95639 269 aaKnown RBP20.66■□□□□ 0.9
LIMS2-201ENST00000324938 CPNE6O95741 557 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 ANXA4P09525 319 aaPredicted RBP20.66■□□□□ 0.9
LIMS2-201ENST00000324938 HLA-EP13747 358 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 PIGAP37287 484 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 VIPR2P41587 438 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 KCNAB2Q13303 367 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 RAB39AQ14964 217 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 ANKRD26P1Q6NSI1 321 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 MED27Q6P2C8 311 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 XKR5Q6UX68 686 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 TRAPPC5Q8IUR0 188 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 CFAP206Q8IYR0 622 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 OR10Q1Q8NGQ4 319 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 SH3KBP1Q96B97 665 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 REPS1Q96D71 796 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 WDR34Q96EX3 536 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 PHF12Q96QT6 1004 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 CXorf21Q9HAI6 301 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 DPP7Q9UHL4 492 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 PCDHB11Q9Y5F2 797 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 CHD7Q9P2D1 2997 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 HS6ST1O60243 411 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 ZNF682O95780 498 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 C6P13671 934 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 TIA1P31483 386 aaKnown RBP eCLIP20.66■□□□□ 0.9
LIMS2-201ENST00000324938 HPCAL1P37235 193 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 CTBSQ01459 385 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 PPP1R8Q12972 351 aaKnown RBP20.66■□□□□ 0.9
LIMS2-201ENST00000324938 SPIDRQ14159 915 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 GAB4Q2WGN9 574 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 ANKRD34AQ69YU3 496 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 RAET1GQ6H3X3 334 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 SYTL1Q8IYJ3 562 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 ZNF420Q8TAQ5 688 aaPredicted RBP20.66■□□□□ 0.9
LIMS2-201ENST00000324938 HDAC2Q92769 488 aaKnown RBP20.66■□□□□ 0.9
LIMS2-201ENST00000324938 LIN28AQ9H9Z2 209 aaKnown RBP20.66■□□□□ 0.9
LIMS2-201ENST00000324938 EBF1Q9UH73 591 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 RPS6KA6Q9UK32 745 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 GMEB1Q9Y692 573 aa20.66■□□□□ 0.9
LIMS2-201ENST00000324938 COL4A3Q01955 1670 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 GABRR3A8MPY1 467 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 SEMG1P04279 462 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 GPR1P46091 355 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 SLC6A11P48066 632 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 RPS13P62277 151 aaKnown RBP20.65■□□□□ 0.9
LIMS2-201ENST00000324938 DPTQ07507 201 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 RFX4Q33E94 735 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 C10orf62Q5T681 223 aaPredicted RBP20.65■□□□□ 0.9
LIMS2-201ENST00000324938 CPTPQ5TA50 214 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 SHQ1Q6PI26 577 aaKnown RBP20.65■□□□□ 0.9
LIMS2-201ENST00000324938 CPA6Q8N4T0 437 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 SMG7Q92540 1137 aaKnown RBP20.65■□□□□ 0.9
LIMS2-201ENST00000324938 LINC00615Q96LM1 132 aaPredicted RBP20.65■□□□□ 0.9
LIMS2-201ENST00000324938 TUBA1CQ9BQE3 449 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 SPATA9Q9BWV2 254 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 SGPP1Q9BX95 441 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 GABARAPL1Q9H0R8 117 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 IL1RAPQ9NPH3 570 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 VNN3Q9NY84 501 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 TMEFF2Q9UIK5 374 aaPredicted RBP20.65■□□□□ 0.9
LIMS2-201ENST00000324938 CDC14AQ9UNH5 594 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 PCDHGA8Q9Y5G5 932 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 KIF26AQ9ULI4 1882 aaPredicted RBP20.65■□□□□ 0.9
LIMS2-201ENST00000324938 NFATC1O95644 943 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 ADRB3P13945 408 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 CRHBPP24387 322 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 DCKP27707 260 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 ELAVL3Q14576 367 aaKnown RBP20.65■□□□□ 0.9
LIMS2-201ENST00000324938 HKDC1Q2TB90 917 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 ZC3H12BQ5HYM0 836 aaKnown RBP20.65■□□□□ 0.9
LIMS2-201ENST00000324938 GALNT18Q6P9A2 607 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 CHST15Q7LFX5 561 aaPredicted RBP20.65■□□□□ 0.9
LIMS2-201ENST00000324938 ARL10Q8N8L6 244 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 HERVK_113Q902F9 699 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 C12orf43Q96C57 262 aaKnown RBP20.65■□□□□ 0.9
LIMS2-201ENST00000324938 COQ8BQ96D53 544 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 DTNBP1Q96EV8 351 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 DOK1Q99704 481 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 EFCAB11Q9BUY7 163 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 TPT1P8Q9HAU6 139 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 PRKAG2Q9UGJ0 569 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 DYRK1BQ9Y463 629 aa20.65■□□□□ 0.9
LIMS2-201ENST00000324938 B4GAT1O43505 415 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 NPPBP16860 134 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 IDSP22304 550 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 PRKACGP22612 351 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 KDELR2P33947 212 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 GTF2H3Q13889 308 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 EIF4HQ15056 248 aaKnown RBP20.64■□□□□ 0.89
LIMS2-201ENST00000324938 C11orf91Q3C1V1 193 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 ANXA8L1Q5VT79 327 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 BROXQ5VW32 411 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 DCP2Q8IU60 420 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms