RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 ACTG2P63267 376 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 TLR1Q15399 786 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 SYT16Q17RD7 645 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 HSDL1Q3SXM5 330 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 EMC10Q5UCC4 262 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 REEP3Q6NUK4 255 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF676Q8N7Q3 588 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 CDCA5Q96FF9 252 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 HSPA12BQ96MM6 686 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF285Q96NJ3 590 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 PKP2Q99959 881 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 B3GAT2Q9NPZ5 323 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 HCN4Q9Y3Q4 1203 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 ZFP37Q9Y6Q3 630 aaPredicted RBP7.44□□□□□ -1.22
SF3B3-201ENST00000302516 MYO9BQ13459 2157 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 PCCBP05166 539 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 CD52P31358 61 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 LILRA4P59901 499 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 PCLAFQ15004 111 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 POM121L1PQ3SYA9 428 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 PIGGQ5H8A4 983 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 ATG9BQ674R7 924 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 UTS2BQ765I0 119 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 FANK1Q8TC84 345 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 DENND1AQ8TEH3 1009 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 GAL3ST3Q96A11 431 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 PCED1BQ96HM7 432 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 HEPHQ9BQS7 1158 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 ELAC1Q9H777 363 aaKnown RBP7.44□□□□□ -1.22
SF3B3-201ENST00000302516 TREM1Q9NP99 234 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 NUFIP1Q9UHK0 495 aaKnown RBP7.44□□□□□ -1.22
SF3B3-201ENST00000302516 FBXW2Q9UKT8 454 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 RIMKLBQ9ULI2 386 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 MYO5AQ9Y4I1 1855 aaKnown RBP7.44□□□□□ -1.22
SF3B3-201ENST00000302516 CREG1O75629 220 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 CTNNB1P35222 781 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 ST3GAL3Q11203 375 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 GANABQ14697 944 aaKnown RBP7.44□□□□□ -1.22
SF3B3-201ENST00000302516 MFSD2AQ8NA29 543 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 C2CD4AQ8NCU7 369 aaPredicted RBP7.44□□□□□ -1.22
SF3B3-201ENST00000302516 SHKBP1Q8TBC3 707 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 KIAA1191Q96A73 305 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 NUS1Q96E22 293 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 MIA3Q5JRA6 1907 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 HTRA2O43464 458 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 EOMESO95936 686 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 POU2F1P14859 743 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF30P17039 623 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 GSTM2P28161 218 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 CDH11P55287 796 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 C6orf89Q6UWU4 347 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 MARCH9Q86YJ5 346 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 CILP2Q8IUL8 1156 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 FAM156AQ8NDB6 213 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 ZMIZ2Q8NF64 920 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 CMASQ8NFW8 434 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 BPIFB1Q8TDL5 484 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 GPR151Q8TDV0 419 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 MTERF1Q99551 399 aaKnown RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 C5P01031 1676 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 A0A1W2PRQ8 180 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TRIM64CA6NLI5 447 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 FAAHO00519 579 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 CSNK2A2P19784 350 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 BMP8BP34820 402 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 SLC13A2Q13183 592 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 USF2Q15853 346 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 CARTPTQ16568 116 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 BMP8AQ7Z5Y6 402 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TAC4Q86UU9 113 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 LRRN4Q8WUT4 740 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 UNKLQ9H9P5 680 aaKnown RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 PHF24Q9UPV7 400 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TBC1D3DA0A087WVF3 549 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TBC1D3IA0A087WXS9 549 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TBC1D3EA0A087X179 549 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TBC1D3KA0A087X1G2 549 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TBC1D3FA6NER0 549 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TBC1D3LB9A6J9 549 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TMEM63AO94886 807 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 HLA-DQB2P05538 268 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TBC1D3HP0C7X1 549 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 BLKP51451 505 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TAS2R39P59534 338 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 RPA4Q13156 261 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 RAB39AQ14964 217 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TARBP2Q15633 366 aaKnown RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 BTBD16Q32M84 506 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 EEF1DP3Q658K8 133 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TBC1D3GQ6DHY5 549 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TBC1D3CQ6IPX1 549 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 AMZ2Q86W34 360 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TBC1D3Q8IZP1 549 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TRUB1Q8WWH5 349 aaKnown RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 MAFIPQ8WZ33 124 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 SMOC2Q9H3U7 446 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 SRMSQ9H3Y6 488 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TIAM2Q8IVF5 1701 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 BORCS7-ASMTA0A0B4J1R7 106 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 ITM2AO43736 263 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms