RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 SLC17A4Q9Y2C5 497 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 TSC22D4Q9Y3Q8 395 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 PIAS3Q9Y6X2 628 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 ELOVL7A1L3X0 281 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 C7orf72A4D263 438 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 GABRR3A8MPY1 467 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 RFXANKO14593 260 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 GSTA4O15217 222 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 KCNJ13O60928 360 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 TGFB1P01137 390 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 SLC35G4P0C7Q5 338 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 C7P10643 843 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 PIM1P11309 404 aaPredicted RBP9.23□□□□□ -0.93
TRIM55-201ENST00000276573 FCGR1AP12314 374 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 CDH1P12830 882 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 ACP5P13686 325 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 COX7A2P14406 83 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 MAT2AP31153 395 aaKnown RBP9.23□□□□□ -0.93
TRIM55-201ENST00000276573 TIA1P31483 386 aaKnown RBP eCLIP9.23□□□□□ -0.93
TRIM55-201ENST00000276573 POLE2P56282 527 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 MEF2AQ02078 507 aaPredicted RBP9.23□□□□□ -0.93
TRIM55-201ENST00000276573 GRSF1Q12849 480 aaKnown RBP eCLIP9.23□□□□□ -0.93
TRIM55-201ENST00000276573 PDK3Q15120 406 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 DUOXA1Q1HG43 343 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 GALNT18Q6P9A2 607 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 GCNT7Q6ZNI0 430 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 ZBTB49Q6ZSB9 765 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 FAM129CQ86XR2 697 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 MICU2Q8IYU8 434 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 PHACTR4Q8IZ21 702 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 SLC44A3Q8N4M1 653 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 MARVELD2Q8N4S9 558 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 ZNF740Q8NDX6 193 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 GPR156Q8NFN8 814 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 STARD8Q92502 1023 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 NELL1Q92832 810 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 MIEF2Q96C03 454 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 CENPNQ96H22 339 aaPredicted RBP9.23□□□□□ -0.93
TRIM55-201ENST00000276573 ZNF597Q96LX8 424 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 FERD3LQ96RJ6 166 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 NRTNQ99748 197 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 CIB1Q99828 191 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 TIMM29Q9BSF4 260 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 BTBD1Q9H0C5 482 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 Q9H521 79 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 PRM3Q9NNZ6 103 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 FAM120CQ9NX05 1096 aaKnown RBP9.23□□□□□ -0.93
TRIM55-201ENST00000276573 SPATA7Q9P0W8 599 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 SCOCQ9UIL1 159 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 FZD4Q9ULV1 537 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 INVSQ9Y283 1065 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 NCKAP1Q9Y2A7 1128 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 BTBD3Q9Y2F9 522 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 WDR37Q9Y2I8 494 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 AK5Q9Y6K8 562 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 PRR19A6NJB7 356 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 FPGTO14772 594 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 SCAMP2O15127 329 aaKnown RBP9.23□□□□□ -0.93
TRIM55-201ENST00000276573 YY2O15391 372 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 SLC31A1O15431 190 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 TPST1O60507 370 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 SMNDC1O75940 238 aaKnown RBP eCLIP9.23□□□□□ -0.93
TRIM55-201ENST00000276573 SCELO95171 688 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 LAMP1P11279 417 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 CKMT2P17540 419 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 IDSP22304 550 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 MAP7Q14244 749 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 NRF1Q16656 503 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 PYCR3Q53H96 274 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 CPTPQ5TA50 214 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 TMIGD1Q6UXZ0 262 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 USP30Q70CQ3 517 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 ARMCX6Q7L4S7 300 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 C17orf64Q86WR6 236 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 KRT78Q8N1N4 520 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 METTL4Q8N3J2 472 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 OR52E4Q8NGH9 312 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 CDC26Q8NHZ8 85 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.23□□□□□ -0.93
TRIM55-201ENST00000276573 SMPDL3AQ92484 453 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 COQ8BQ96D53 544 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 FAM120BQ96EK7 910 aaKnown RBP9.23□□□□□ -0.93
TRIM55-201ENST00000276573 AURKBQ96GD4 344 aaPredicted RBP9.23□□□□□ -0.93
TRIM55-201ENST00000276573 SEPHS2Q99611 448 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 CENPKQ9BS16 269 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 TBCDQ9BTW9 1192 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 DUSP26Q9BV47 211 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 ACAT2Q9BWD1 397 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 CHID1Q9BWS9 393 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 PCBD2Q9H0N5 130 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 OR51B5Q9H339 312 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 DLGAP2Q9P1A6 1054 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 ADGRE2Q9UHX3 823 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 CD207Q9UJ71 328 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 ERVK-11Q9UQG0 969 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 PLEKHM1Q9Y4G2 1056 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 AP4B1Q9Y6B7 739 aa9.23□□□□□ -0.93
TRIM55-201ENST00000276573 ATG2BQ96BY7 2078 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 DOCK9Q9BZ29 2069 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 GNG14A0A1W2PPG7 69 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms