RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 PEX1O43933 1283 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 KCNJ13O60928 360 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 APBB3O95704 486 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 OPRD1P41143 372 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 KCNC1P48547 511 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 NCBP2P52298 156 aaKnown RBP eCLIP13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 DCDC1P59894 354 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 SRP54P61011 504 aaKnown RBP13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 RABL3Q5HYI8 236 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 CATSPEREQ5SY80 951 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 NAIF1Q69YI7 327 aaPredicted RBP13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 KRTCAP2Q8N6L1 136 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 LYSMD1Q96S90 227 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 PLA2G2FQ9BZM2 168 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 KRCC1Q9NPI7 259 aaPredicted RBP13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 SEC14L3Q9UDX4 400 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 ZNF236Q9UL36 1845 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 FADS2P1A8MWK0 482 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 WFS1O76024 890 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 FGF4P08620 206 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 MLLT3P42568 568 aaPredicted RBP13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 SMAD4Q13485 552 aaKnown RBP13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 TMEM207Q6UWW9 146 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 CCDC81Q6ZN84 652 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 PDZD3Q86UT5 571 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 CDK20Q8IZL9 346 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 OR9Q1Q8NGQ5 310 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 CAMK1GQ96NX5 476 aa13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 FARSBQ9NSD9 589 aaKnown RBP13.98□□□□□ -0.17
PDLIM2-201ENST00000265810 MTHFD1P11586 935 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 CD6P30203 668 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 SH3BGRP55822 239 aaPredicted RBP13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 ABHD13Q7L211 337 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 TMCO5AQ8N6Q1 288 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 LMNTD1Q8N9Z9 388 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 OR4K1Q8NGD4 311 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 F2RL3Q96RI0 385 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 SLC9A8Q9Y2E8 581 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 C2orf74A8MZ97 194 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 K7ESM1 405 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 DNAJA2O60884 412 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 JUNP05412 331 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 CTSLP07711 333 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 PRR5P85299 388 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 DEF8Q6ZN54 512 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 LILRA3Q8N6C8 439 aaPredicted RBP13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 TRIM4Q9C037 500 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 C1orf21Q9H246 121 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 GLOD5A6NK44 160 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 ZNF763Q0D2J5 394 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 COL13A1Q5TAT6 717 aaPredicted RBP13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 NEK10Q6ZWH5 1172 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 ADGRG6Q86SQ4 1221 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 ZFAND4Q86XD8 727 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 ZSWIM9Q86XI8 627 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 PHF10Q8WUB8 498 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 ZNF419Q96HQ0 510 aaPredicted RBP13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 CIB1Q99828 191 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 YIPF3Q9GZM5 350 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 AIG1Q9NVV5 245 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 KLHL20Q9Y2M5 609 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 RTCAO00442 366 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 CXCR6O00574 342 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 ITGA2P17301 1181 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 ENGP17813 658 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 CSNK2A2P19784 350 aaPredicted RBP13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 ACADVLP49748 655 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 ACTR3P61158 418 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 HNRNPKP61978 463 aaKnown RBP eCLIP13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 RFTN2Q52LD8 501 aaPredicted RBP13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 CDKL4Q5MAI5 379 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 PPP4R4Q6NUP7 873 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 SLC44A3Q8N4M1 653 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 PLA2G15Q8NCC3 412 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 ZNF483Q8TF39 744 aaPredicted RBP13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 REXO5Q96IC2 774 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 DPYSL5Q9BPU6 564 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 KCNK13Q9HB14 408 aa13.97□□□□□ -0.17
PDLIM2-201ENST00000265810 URB1O60287 2271 aaKnown RBP13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 SCELO95171 688 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 FAM58BPP0C7Q3 252 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 MPIP34949 423 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 AVPR1BP47901 424 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 ATP4BP51164 291 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 CTBSQ01459 385 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 TMEM52BQ4KMG9 183 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 HENMT1Q5T8I9 393 aaKnown RBP13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 TMEM215Q68D42 235 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 CAPRIN2Q6IMN6 1127 aaKnown RBP13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 SFRP1Q8N474 314 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 PDPRQ8NCN5 879 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 DNAJB8Q8NHS0 232 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 VANGL1Q8TAA9 524 aaPredicted RBP13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 WDR60Q8WVS4 1066 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 HSPA12BQ96MM6 686 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 CNPPD1Q9BV87 410 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 MUC13Q9H3R2 512 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 ADAP2Q9NPF8 381 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 UTS2RQ9UKP6 389 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms